CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP19_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana GN=TOPP9 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.946e-46
Identity = 84/184 (45.65%), Postives = 127/184 (69.02%), Query Frame = 2
Query:   92 LDQWIAKVKEGQ-----HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            LD  I ++ EG+      L E E++ LC   ++I + + N+  +++P+ +CGDIHGQ+ DL++LF+ GG+ P  NY+F+GD+VDRG  SLE   +LL  K RYP+ I LLRGNHE  ++ ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSP++  + QIR I+R  E
Sbjct:   14 LDDIIRRLLEGKGGKQVQLSEVEIRQLCVNARQIFLSQPNLLELHAPIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIFLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLGQIREIQRPTE 196          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.494e-45
Identity = 82/169 (48.52%), Postives = 119/169 (70.41%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            VK+ Q + E E++ LC   KE+ + + N+  + +P+ +CGD+HGQF DL++LF+ GG+ P  NY+F+GD+VDRG  S+E   +LL  K +Y  N  LLRGNHE   + +VYGFYDEC+R+Y N   W+  T+ F+ L +SA+ID  +LC+HGGLSPDI+++D IR I R
Sbjct:   22 VKQAQ-ITETEIRQLCLASKEVFLSQPNLLELEAPIKICGDVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKVKYKFNFFLLRGNHECASINRVYGFYDECKRRY-NVRLWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSLDDIRRIPR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP12_YEAST (Serine/threonine-protein phosphatase PP1-2 OS=Saccharomyces cerevisiae GN=GLC7 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.494e-45
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 2
Query:   74 VEN*MDLDQWIAKVKEGQH--LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            V+N +D    +   K GQ   L E+E++ LC   + I I++  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AIID  + C+HGGLSPD+ +++QIR + R
Sbjct:    8 VDNIIDRLLEVRGSKPGQQVDLEENEIRYLCSKARSIFIKQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCMHGGLSPDLNSMEQIRRVMR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.494e-45
Identity = 86/186 (46.24%), Postives = 125/186 (67.20%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +DLD  I ++ E +         L EDE++ LC   +EI I +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE NY+F+GD+VDRG  SLEV  +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AIID  +  +HGGLSPD+ ++DQI+ I R
Sbjct:    6 VDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 78/163 (47.85%), Postives = 115/163 (70.55%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            L E E++ LC   +EI + + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSPD+  +D+I+ + R
Sbjct:   41 LSESEIRQLCTVSREIFLSQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLTHLDEIKSLPR 202          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 80/163 (49.08%), Postives = 115/163 (70.55%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            L E E++ LC   KEI + + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSPD+  +D+IR + R
Sbjct:   34 LSEAEIRSLCTASKEIFLHQPNLLELEAPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKTNTDCFNCLPVAALIDDKILCMHGGLSPDLTDLDEIRNLPR 195          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 84/186 (45.16%), Postives = 125/186 (67.20%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +DLD  I ++ E +         L E+E++ L     EI I +  +  + +P+ +CGDIHGQ++DL++LF+ GG  P++NY+F+GD+VDRG  SLE   +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+Y N+  W+  TD F+ L ++AIID  + C+HGGLSPD++ +DQIR I R
Sbjct:    3 IDLDSIITRLLEPRTTKPGKLVDLAEEEIRYLTVQATEIFINQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NSKLWKAFTDCFNCLPVAAIIDEKIFCMHGGLSPDLKNMDQIRRITR 187          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 85/186 (45.70%), Postives = 126/186 (67.74%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++LD  I ++ E Q         L E+E++ LC   +EI + +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K RYP N  LLRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AI+D  + C HGGLSPD+++++QIR I R
Sbjct:    7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 191          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1A_CANFA (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis familiaris GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.479e-45
Identity = 84/186 (45.16%), Postives = 126/186 (67.74%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++LD  I ++ E Q         L E+E++ LC   +EI + +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AI+D  + C HGGLSPD+++++QIR I R
Sbjct:    7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDXFNXLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 191          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.479e-45
Identity = 78/172 (45.35%), Postives = 119/172 (69.19%), Query Frame = 2
Query:  104 IAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +A+  +   L E E++ LC   ++I +++ N+  + +P+ +CGDIHGQ+ DL++LF+ GG  P  NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSPD+  +D+IR + R
Sbjct:   31 LARPGKQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYPGNFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLDHLDEIRNLPR 201          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP19_ARATH2.946e-4645.65Serine/threonine-protein phosphatase PP1 isozyme 9... [more]
PP16_ARATH2.494e-4548.52Serine/threonine-protein phosphatase PP1 isozyme 6... [more]
PP12_YEAST2.494e-4545.65Serine/threonine-protein phosphatase PP1-2 OS=Sacc... [more]
PP11_SCHPO2.494e-4546.24Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
PP1_ORYSJ4.255e-4547.85Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP12_TOBAC4.255e-4549.08Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP1_DICDI5.557e-4545.16Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
PP1A_MOUSE5.557e-4545.70Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_CANFA9.479e-4545.16Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP14_ARATH9.479e-4545.35Serine/threonine-protein phosphatase PP1 isozyme 4... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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