CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:587..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.387e-29
Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 511
            T+A+VE    +    LI LSEQ+L+DCD S + GCNGGL+  AFE I+  GG+ TE DYP+   +  C   R    VV+ +  Y  V +N+EK      A  P+ +AI+   +    Y  G+ +      L+H V  VGYG ENG  YW+ KN+WG  WGE GY R+ +NV
Sbjct:  173 TLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVN--YYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNV 340          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.117e-29
Identity = 75/196 (38.27%), Postives = 101/196 (51.53%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCG-TSLDHGVTAVGYGTEN-----GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIA 544
            T   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+   +        I ++  +P N+       V+  P+++A +   + +Q Y  G+F   C   SLDHG+  VGY  +N        YWIVKNSWG+ WGE GYI + R         CG++
Sbjct:  147 TTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAAD--AVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-----KNTCGVS 335          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.117e-29
Identity = 75/185 (40.54%), Postives = 107/185 (57.84%), Query Frame = 2
Query:    2 TIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 526
            ++AA+EG   I K    + + LSE+ +V C     N GCNGGL    +++II++G +  E DYPY   D +C T  K+   +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:  123 SLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFAKIT--GYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.071e-29
Identity = 78/167 (46.71%), Postives = 100/167 (59.88%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEA 484
            T  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    ++ +     I  Y++V    E +LQ A  N PVSVAI+    +FQLYESGI +   C  T LDHGV  VGYG+ +        +S GSS G++
Sbjct:  140 TTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVLVVGYGSGS-------SSSSGSSSGKS 299          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.069e-29
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E DYPY+  DG+C        V     Y  + + +EK         P+ VAI+   +    Y  GI         +H V  VGYG EN   YWI+KN+WG  WGE GY R+++N+       CGI  E
Sbjct:  142 TLASLESQFAIKHNQLINLSEQQLIDCDY-VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVN--YRRGIMRYCSNYGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNI-----NACGIRNE 316          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.069e-29
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 511
            +  +E +  I    LI+LSEQ+L+DCD++ N  C+GGLM  AFE +++ GG+  E DYPY+   G C    K   +        +  N+E   ++ +   P+++AI+   ++   Y  GI        L+H V  VGYGTE G  YW +KNSWGS WGE GY R++RN+
Sbjct:  156 VGTLETLYAIKHNYLINLSEQQLIDCDSA-NMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASIS--TYSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNI 321          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  141 TLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN--YKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNI-----NACGMRNE 315          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++ GGI  E DYPY+A +G C        V     Y  + + +EK      +  P+ VAI+   +    Y+ GI        L+H V  VGY  ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  142 TLGSLESQFAIKHNQFINLSEQQLIDCDF-VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVN--YKRGIMKYCANHGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNI-----NACGIQNE 316          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28
Identity = 71/183 (38.80%), Postives = 100/183 (54.64%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E DYPY+A +G C        V     Y  V L +EK         P+ VAI+   +    Y+ GI        L+H V  VGYG ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  142 TLGSLESQFAIKHDQLINLSEQQLIDCDF-VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVG--YKRGIIRYCENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNI-----NACGIKNE 316          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28
Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 2
Query:    2 TIAAVEG---INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 526
            ++AA+EG   I K    + + LSE+ +     + N GCNGGL    +++II++G +  E DYPY   D +C T  K+ + +T   Y  VP N+E  L+ A++   + V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+SWG+ GYI M  E N  G  T
Sbjct:  119 SLAALEGRLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFRKIT--GYTKVPRNNEAELKAALSQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVAT 299          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATV_NPVLD2.387e-2941.52Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CYSP1_DICDI3.117e-2938.27Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CPP2_ENTHI3.117e-2940.54Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CYSP4_DICDI4.071e-2946.71Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATV_NPVHC9.069e-2937.70Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATV_NPVAH9.069e-2938.46Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATV_NPVRO2.020e-2837.16Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCF2.020e-2837.16Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAP2.020e-2838.80Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
ACP2_ENTHI2.020e-2839.67Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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