CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:587..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  141 TLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN--YKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNI-----NACGMRNE 315          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.446e-28
Identity = 77/186 (41.40%), Postives = 104/186 (55.91%), Query Frame = 2
Query:    2 TIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 526
            +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++NG I  E DYPY   D +C   R + K    I  Y  V  N+E  L+ A++   V V+I+   + FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WGE GYI M  E N  G  T
Sbjct:  123 SIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG-IAKESDYPYTGSDSTC---RSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.446e-28
Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG     TG+L  LS Q L+DC  T  N+GC  G    AFE+++ N G++ E  YPY+  DG C  YR       I DY ++P N E  L  AVA+  PVS AI+    +F+ Y  GI +   C +  ++H V  VGYG+E    +G +YW++KNSWG  WG  GY++    +A      CGIA  ASY
Sbjct:  146 AIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPC-RYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQ----IAKDHNNHCGIASLASY 330          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.501e-28
Identity = 70/183 (38.25%), Postives = 97/183 (53.01%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+A++E    I    LI+LSEQ+++DCD S + GC GGL+  AFE II  GG+  E DYPY++ +  C        V        + + +EK         P+ VAI+   +    YE GI        L+H V  VGYG EN   YWI+KNSWG+ WGE G+ ++++NV       CGI  E
Sbjct:  141 TLASLESQFAIAHDRLINLSEQQMIDCD-SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN--YEQGIIKYCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNV-----NACGIKNE 315          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.501e-28
Identity = 78/186 (41.94%), Postives = 106/186 (56.99%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DNG +   +DYPY A DG+C T  K      +  + D+   DE  L +A+  + VSVA++     +Q Y SG+ + +C  +L+HGV  VG   +     W ++NSWGSSWGEAG+IR+    AG  T  CGI    S+
Sbjct:  141 VGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNG-LAEAKDYPYTAKDGTCKTSVKRP-YTHVQGFTDIDSCDE--LAQAIQERTVSVAVDAN--PWQFYRSGVLS-KCTKNLNHGVVLVGVQADGA---WKIRNSWGSSWGEAGHIRL----AGGDT--CGICAAPSF 310          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 69/150 (46.00%), Postives = 84/150 (56.00%), Query Frame = 2
Query:    2 TIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFT--GRCGTSLDHGVTAVGYGTENGA 436
            T  A EG   +  G  +L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    +        +  Y +V    E  L   V   P SVAI+    +FQLY SGI+       T LDHGV AVG+GT +G+
Sbjct:  139 TTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACSSTQLDHGVLAVGFGTGSGS 288          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E DYPY+A +G C        V     Y  V + +EK         P+ VAI+   +    Y+ G+        L+H V  VGY  ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  142 TLGSLESQFAIKHDQLINLSEQQLIDCDF-VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVN--YKRGVIRYCANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNI-----NACGIQNE 316          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 67/183 (36.61%), Postives = 98/183 (53.55%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+ ++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  141 TLGSLESQFAIKHNELINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVN--YKQGIIKYCFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNI-----NACGMRNE 315          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27
Identity = 70/183 (38.25%), Postives = 98/183 (53.55%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAV-ANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            I  +E    I    LI LSEQ+L+DCD   + GCNGGLM  AF+ ++  GG++TE DYPY+  +  C T       V ++      + DE  L++ V    PV++A++   M    Y  GI        L+H V  +G+G EN   YWI+KNSWG  WGE G++R+ RNV       CG+  E
Sbjct:  186 IGNIESQYAIRHNKLIDLSEQQLLDCD-EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMC-TLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDA--MDIINYRRGILNQCHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNV-----NACGLLNE 359          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKA-VANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            TIA +E +  I     ++LSEQ LV+CD + N GC GGLM +A E I+  GG+ + E+ PY   DG C   +K+   ++I       L +E  L++  V N P+SVAI+   +    Y++GI    C  +  L+H V  VGYG +N   YWI+KNSWG+ WGE GY R++R+        CG+  E
Sbjct:  153 TIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVC---KKSPFELSISGSRRYVLQNENKLRELLVVNGPISVAIDVSDLIN--YKAGI-ADICENNEGLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRD-----KNSCGMMNE 326          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATV_NPVAC2.639e-2837.16Viral cathepsin OS=Autographa californica nuclear ... [more]
CPP1_ENTHI3.446e-2841.40Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATJ_MOUSE3.446e-2840.84Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATV_NPVEP4.501e-2838.25Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATL2_PARTE4.501e-2841.94Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP7_DICDI1.310e-2746.00Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CATV_NPVCD1.310e-2737.16Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVBM1.310e-2736.61Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATV_NPVHZ4.977e-2738.25Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_GVCP4.977e-2739.25Viral cathepsin OS=Cydia pomonella granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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