CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:587..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.458e-42
Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF++IIDN GID+E  YPYKA D  C  Y    +  T   Y ++P   E  L++AVAN+ PV V ++    +F LY SG++    C   ++HGV  +GYG  NG +YW+VKNSWGS++GE GYIRM RN        CGIA   SY
Sbjct:  145 VGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKG----NHCGIASYPSY 327          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.193e-42
Identity = 96/190 (50.53%), Postives = 121/190 (63.68%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GIDTE  YPYKAID +C  Y       T+  Y +    DE ALQ AV N+ PVSV I+ G  +F  Y  G++    C +   +H VTAVGYGT+ NG DYWIVKNSWG+ WGE+GYI+M RN        C IA  + Y
Sbjct:  136 VAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC-RYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARN----RDNNCAIATYSVY 320          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 7.153e-42
Identity = 88/188 (46.81%), Postives = 125/188 (66.49%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            +IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII N G+ +   YPYKA  G+C T    N+  +T   Y  V  N+E+ +  AV+NQP++ A++  G  FQ Y+ G+FTG CGT L+H +  +GYG ++ G  +WIV+NSWG+ WGE GYIR+ R+V+ +  G CGIAM+  Y
Sbjct:  152 SIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAYIT--RYTYVQRNNERNMMYAVSNQPIAAALDASGN-FQHYKRGVFTGPCGTRLNHAIVIIGYGQDSSGKKFWIVRNSWGAGWGEGGYIRLARDVSSSF-GLCGIAMDPLY 333          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 9.342e-42
Identity = 92/190 (48.42%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYKA D  C    KN +  T   Y  +P  DE AL++AVA + PVSV I+    +F  Y+SG++    C  +++HGV  VGYGT +G DYW+VKNSWG ++G+ GYIRM RN        CGIA   SY
Sbjct:  153 VGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKN-RAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARN----NKNHCGIASYCSY 337          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.220e-41
Identity = 90/189 (47.62%), Postives = 118/189 (62.43%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYKA+D  C  Y    +  T   Y ++P   E  L++AVAN+ PVSV ++    +F LY SG++    C  +++HGV  VGYG  NG +YW+VKNSWG ++GE GYIRM RN        CGIA   SY
Sbjct:  145 VGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG----NHCGIASFPSY 328          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.550e-41
Identity = 88/191 (46.07%), Postives = 120/191 (62.83%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C  +  N    T   Y  +    E AL+ A  +  P+SVAI+    +FQ Y +G++    C +S LDH V AVGYG+E G D+W+VKNSW +SWGE+GYI+M RN        CGIA +A Y
Sbjct:  134 TTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC-RFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARN----RNNNCGIATDACY 319          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 4.636e-41
Identity = 87/186 (46.77%), Postives = 111/186 (59.68%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  NG I     YPY A   +C   +     V  +    V  N+E +L  A+A+QPVSV +E  G  FQ Y+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG  WGE GYIR+ R  +G   G CG+   + Y
Sbjct:  162 TVATVEGINKIKTGNLVELSEQELVDCDKQ-SYGCNRGYQSTSLQYVAQNG-IHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKNSWGPGWGENGYIRI-RRASGNSPGVCGVYRSSYY 344          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.636e-41
Identity = 95/191 (49.74%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+EE YPY+A + SC  Y     V     + D+P   EKAL KAVA   P+SVAI+ G  +F  Y+ GI F   C +  +DHGV  VGYG E    + + YW+VKNSWG  WG  GYI+M ++        CGIA  ASY
Sbjct:  146 ALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESC-KYNPEYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD----RRNHCGIASAASY 330          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 7.908e-41
Identity = 96/190 (50.53%), Postives = 120/190 (63.16%), Query Frame = 2
Query:   14 VEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC  YR    V     + D+P   EKAL KAVA   P+SVA++    + Q Y SGI +   C + +LDHGV  VGYG E    N   YW+VKNSWGS WG  GYI+    +A      CG+A  ASY
Sbjct:  147 LEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC-KYRAEFAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIK----IAKDRDNHCGLATAASY 330          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.005e-40
Identity = 95/190 (50.00%), Postives = 117/190 (61.58%), Query Frame = 2
Query:   14 VEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC  YR    V     + D+P   EKAL KAVA   P+SVA++    + Q Y SGI +   C +  LDHGV  VGYG E    N   YW+VKNSWG  WG  GYI+    +A      CG+A  ASY
Sbjct:  147 LEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC-KYRAEYAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIK----IAKDRNNHCGLATAASY 330          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATS_SAIBB2.458e-4247.87Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CRUST_PANBO4.193e-4250.53Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
ANAN_ANACO7.153e-4246.81Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATS_MOUSE9.342e-4248.42Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_HUMAN1.220e-4147.62Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CYSP1_HOMAM3.550e-4146.07Digestive cysteine proteinase 1 OS=Homarus america... [more]
PAPA4_CARPA4.636e-4146.77Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATL1_CERAE4.636e-4149.74Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_MOUSE7.908e-4150.53Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_RAT3.005e-4050.00Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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