CX294781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 2.112e-44 Identity = 95/170 (55.88%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH-GSLWIRFTYAY 627 AP ALP EF ++ K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G S TYAY Sbjct: 39 APELALPRGMQPTEFLRSFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAY 208
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_HUMAN (Proteasome subunit beta type-8 OS=Homo sapiens GN=PSMB8 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43 Identity = 100/193 (51.81%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 82 ESTSPFFGSGDELCPELSA----APSFALPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH-GSLWIRFTYAY 627 ES P GSG P + +P ALP EF + + ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G+ S TYAY Sbjct: 16 ESALPVAGSGRRSDPGHYSFSMRSPELALPRGMKPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAY 208
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB5_YEAST (Proteasome component PRE2 OS=Saccharomyces cerevisiae GN=PRE2 PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43 Identity = 94/180 (52.22%), Postives = 122/180 (67.78%), Query Frame = 1 Query: 55 DMKLDTSGLESTSPFFGSGDELCPELSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKG 591 + L++ + S F L A+P L TD D D K + H GTTTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG Sbjct: 23 EQNLESDFVTGASQFQRLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKG 199
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB5_SCHPO (Proteasome subunit beta type-5 OS=Schizosaccharomyces pombe GN=pts1 PE=2 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.335e-43 Identity = 88/150 (58.67%), Postives = 112/150 (74.67%), Query Frame = 1 Query: 142 PSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 591 P +L L DE K+ +K GTTTLAF ++ G++V DSRAS G I+SQ+VKK+IEINPY+LGT+AGGAADCQFW LG++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG + G LYY+DS+G RLKG Sbjct: 36 PQSSLYLRNLTDE-TKNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKG 184
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.049e-43 Identity = 93/170 (54.71%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH-GSLWIRFTYAY 627 AP ALP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G S TYAY Sbjct: 39 APELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAY 208
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_BOVIN (Proteasome subunit beta type-8 OS=Bos taurus GN=PSMB8 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.049e-43 Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 139 APSFALPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH 594 +P ALP EF + ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G+ Sbjct: 39 SPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGN 196
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.872e-43 Identity = 94/172 (54.65%), Postives = 116/172 (67.44%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH-GSLWIRFTYAY 627 AP A+P EF +K+ + + H GTTTLAF F+ GV+VA DSRA+ G YISS V K+IEINP +LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++Y YRGM LS+G+MI GWD+ GPGLYYVD G RL G+ S TYAY Sbjct: 39 APELAVPRGMQPTEFFQSLGENGEKNIRKEMVH--GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAY 208
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB11_HUMAN (Proteasome subunit beta type-11 OS=Homo sapiens GN=PSMB11 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.624e-28 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 124 PELSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 591 P L A +A+P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++ + K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++ YRG+ L V T + GWD +GP L+YV S+G RL+G Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQG 172
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB11_MOUSE (Proteasome subunit beta type-11 OS=Mus musculus GN=Psmb11 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.375e-27 Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 130 LSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 591 L A +A+P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++ + +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++ YRG+ L V T + GWD +GP L+YV S+G L+G Sbjct: 21 LPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQG 172
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18 Identity = 51/136 (37.50%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK-------GHGSL 603 KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R + I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D GG ++ G GSL Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSL 145 The following BLAST results are available for this feature:
BLAST of CX294781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294781 ID=CX294781; Name=CX294781; organism=Citrus clementina; type=EST; length=629bpback to top |