CX294798

Overview
NameCX294798
Unique NameCX294798
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10764 contig Ccv1_Contig10764:58..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.987e-18
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK R      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 2.987e-18
Identity = 61/155 (39.35%), Postives = 89/155 (57.42%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            YE LE +G G+Y+ VYKG+   +  +VALK +   +      +A RE   L+ L+++ N+V+LH+    + E   LV E++ TDL   +     K  GG    +    +K ++ Q+L G+   H+  I+HRDLKP NLLI D G LKLADFG AR
Sbjct:  135 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA-NIVLLHDIIHTK-ETLTLVFEYVHTDLCQYM----DKHPGG----LHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR 279          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK +       VALK++  D ++      A REI  L+ L N PN+V LH+    E++   LV EFL  DL       K+  +     GIS+  +K ++ Q+L G+  CH + ++HRDLKP NLLI   G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLHDVIHTENK-LYLVFEFLHQDL-------KRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQGEIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 64/156 (41.03%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGR-RLSDNLIVALKEVH-DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  L+ +G G Y+ V+KGR +L++NL VALKE+  +++     +A RE+  L+ L+++ N+V LH+     D    LV E+L +DL       K+  +  G+  +S+  +K +M Q+L G+  CH   I+HRDLKP NLLI + G LKLADFG AR
Sbjct:  142 YVKLDKLGEGTYATVFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKNLKHA-NIVTLHDLI-HTDRSLTLVFEYLDSDL-------KQYLDHCGNL-MSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLAR 286          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 64/156 (41.03%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGR-RLSDNLIVALKEVH-DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  L+ +G G Y+ V+KGR +L++NL VALKE+  +++     +A RE+  L+ L+++ N+V LH+     D    LV E+L +DL       K+  +  G+  +S+  +K +M Q+L G+  CH   I+HRDLKP NLLI + G LKLADFG AR
Sbjct:  142 YVKLDKLGEGTYATVFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKNLKHA-NIVTLHDLI-HTDRSLTLVFEYLDSDL-------KQYLDHCGNL-MSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLAR 286          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            YE LE +G G+Y+ VYKG+   +  +VALK +   +      +A RE   L+ L+++ N+V+LH+    + E   LV E++ TDL   + +           G+    +K ++ Q+L G+   H+  I+HRDLKP NLLI D G LKLADFG AR
Sbjct:  135 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA-NIVLLHDIIHTK-ETLTLVFEYVHTDLCQYMEQHPG--------GLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR 279          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  +   +VA+K++           +A REI  L+ L + PN+V L +    +D    L+ EFL  DL   +      +       +    +K ++ QIL G+  CH   ++HRDLKP NLLI D GV+KLADFG AR
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELHH-PNIVCLQDVLM-QDARLYLIFEFLSMDLKKYLDTIPSGQY------LDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGVIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.095e-18
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  DG +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.095e-18
Identity = 59/157 (37.58%), Postives = 84/157 (53.50%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            +Y  +E +G G Y  VYKGR  +   +VA+K++           +A REI  L+ LQ+ PN+V L +    +D    L+ EFL  DL   +      +       I    +K ++ QIL G+  CH   ++HRDLKP NLLI + GV+KLADFG AR
Sbjct:    3 EYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKELQH-PNIVCLLDVLM-QDSRLYLIFEFLSMDLKKYLDSIPSGQY------IDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.655e-18
Identity = 61/169 (36.09%), Postives = 93/169 (55.03%), Query Frame = 1
Query:   28 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFN 510
            ++ K+EIL  VG GAY  V K R    + IVA+K+  D +       +  RE++ L+ L+   N+V L E F R  +   LV E+++ ++  ++ E           G+   ++K ++ Q++  +  CH+N IVHRD+KP NLLI  + VLKL DFG AR L  GN  N
Sbjct:    9 VMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE-NIVELKEAFRRRGK-LYLVFEYVEKNMLELLEEMPN--------GVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGNNAN 167          
The following BLAST results are available for this feature:
BLAST of CX294798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
CDK2_HUMAN2.987e-1839.74Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK14_HUMAN2.987e-1839.35Cell division protein kinase 14 OS=Homo sapiens GN... [more]
CDK2_CARAU3.901e-1839.10Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK18_PONAB3.901e-1841.03Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN3.901e-1841.03Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDK14_MOUSE3.901e-1838.06Cell division protein kinase 14 OS=Mus musculus GN... [more]
CDC2_CHICK3.901e-1837.18Cell division control protein 2 homolog OS=Gallus ... [more]
CDK2_BOVIN5.095e-1839.74Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDC2B_XENLA5.095e-1837.58Cell division control protein 2-B OS=Xenopus laevi... [more]
CDKL5_MOUSE6.655e-1836.09Cyclin-dependent kinase-like 5 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05056A11SK PhIFruit1 Citrus clementina cDNA clone C05056A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294798 ID=CX294798; Name=CX294798; organism=Citrus clementina; type=EST; length=588bp
AGCTGGAGCATCCATACCCGACCCGAGATCATTGCCAAATACGAAATCCT
CGAGTGCGTGGGCTCCGGCGCGTACTCCGACGTGTACAAGGGCCGGCGAT
TATCGGACAACCTGATCGTCGCGCTGAAGGAGGTCCACGACTACCAATCG
GCGTTCCGAGAAATCGAGGCGCTGCAGATCCTACAGAACTCGCCGAACGT
GGTGGTTTTGCACGAGTACTTTTGGCGGGAGGACGAGGACGCCGTGCTGG
TGCTGGAGTTTCTCAAGACCGATTTGGCGACGGTGATTGCGGAGTCCAAG
AAGAAGAGAGAGGGCGGGGGCGATCGTGGAATCAGCGTCGGTGAGATTAA
GAGATGGATGGTCCAGATTTTGTGTGGAGTGGACGCCTGTCACAGGAATA
CGATCGTTCATCGGGATTTGAAGCCTGGGAATTTGTTGATCGGCGATGAT
GGGGTTCTCAAGTTGGCCGATTTTGGCCAGGCAAGGATACTCCTGGGTAA
TGAATTCAATGCTCCTGATGGTAATTCTCAGCCTTGTGAATCCAATGCTC
CATATCAAGATAACATGTCTGAAGCTCCACAAGTTGAT
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