CX294799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-12 Identity = 35/117 (29.91%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 245 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 I T +S ++ + ++F E+P+ N VS T +I + +Q A+ LF +M+ L ++P +FTF S + +S ++ L GK++H + + ++ N V S+++D+Y K S+E Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.536e-12 Identity = 38/113 (33.63%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 260 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 V CG S+ FD +P + V+ TT+I + E A ++FS+M L+ + P EFT ++ +S+ L L G+Q+HA A K+ ++ FVG++++D+Y K SI++ Sbjct: 563 VKCGD----MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.536e-12 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 266 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 CGS +VF+++P + V+ TT+I +++ +A+ F++ML P+EFT SVI ++ A G QLH + K G SNV VGSA+LDLY + +++ Sbjct: 108 CGS----LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 305 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 +FD++ + +VVS T++I R+ K + E LFS ++ RP+E+TF V+ + L LGKQ+H + T+VG F S+++D+Y K +IE Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIE 371
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 281 DKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSS 589 + F + ++VFD++ +LNVV+ T +I R + EAI F M+L +FT SV + LE+L+LGKQLH+WA + GL + V +++D+Y K S+ Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 302 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 QVF+ + D + V+ ++++ + + +YEEA+ L+ R +++ ++FT SVI + + L L GKQ+HA K G SNVFV S+ +D+Y K S+ E Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 2 Query: 305 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +F+E+P+ + V+ T+I + K Y E+I+LF +M +PS+FTF V+ + L D LG+QLHA + G + VG+ ILD Y K + E Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE 303 HSP 2 Score: 70.0922 bits (170), Expect = 9.636e-12 Identity = 35/109 (32.11%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 272 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 ++ + F +F +P VS T +I + ++ + + LF++M N+R + TF +V+ +S + L LGKQLHA+ + G NVF GS ++D+Y K SI++ Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.644e-11 Identity = 30/104 (28.85%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 287 FSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 + +VFDE+P NVV+ T +I + + +++ + +F ML ++ P+E T SV+ + + L+ G+++H + K ++ N G+ ++DLY+K +EE Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.644e-11 Identity = 33/97 (34.02%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 305 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 +F+++P +++S TT+I +++ Y EAI +F +M+ I P E T +VI + L L +GK++H + + G +V++GSA++D+Y K S+E Sbjct: 243 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLE 339
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 302 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 +VFD++ V+ T ++ + + +A+ LF ++ + F F V+ + +LE+LNLGKQ+HA K+GL+S V VG+ ++D YIK SS E Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337 The following BLAST results are available for this feature:
BLAST of CX294799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294799 ID=CX294799; Name=CX294799; organism=Citrus clementina; type=EST; length=600bpback to top |