CX294831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38 Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 33 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS 542 T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS ++ TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T + +L ER + E+ + +KEK YV D +E + SS Sbjct: 81 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWQSREASDRSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQNLLREREHTIPAEQSYEVAKTIKEKFCYVCPDVMKEFVKYDTDSS 258
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACT1_ABSGL (Actin-1 (Fragment) OS=Absidia glauca GN=ACT1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37 Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 3 Query: 21 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 251 RGILTL+YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKMTQIMFETFN PA YV+IQA Sbjct: 64 RGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNAPAFYVSIQA 140
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.685e-37 Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 3 Query: 33 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE 515 T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T + +L +R + E+ + +KEK YV D +E Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.118e-37 Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 3 Query: 21 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 242 RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P+ YVA Sbjct: 84 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNIPSNYVA 157
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.991e-37 Identity = 81/209 (38.76%), Postives = 120/209 (57.42%), Query Frame = 3 Query: 27 ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDG--------QIITIGAERFV 605 + + P+ HG V NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + LAGRD+T+ ++++L ER E+ + +KE +YV D +E + K + +K ++ +G + +G ERF+ Sbjct: 79 VYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCPDIVKEFK--KYDTEPDKWFKTYEGIESVGKKPYNVDVGYERFL 285
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_NEUCR (Actin-related protein 3 OS=Neurospora crassa GN=arp-3 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36 Identity = 81/203 (39.90%), Postives = 119/203 (58.62%), Query Frame = 3 Query: 36 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS--VEKNYELPDGQIIT--IGAERFVA 608 L YPI HG + NWD ME+ W ++ + LRV PE+H LLTE PLNP NRE +I FE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + +AGRD+T + +L +RG + + +++KE+ YV D +E S ++ P G+ +T +G ERF+A Sbjct: 99 LHYPIRHGQIENWDHMERFWSNSIFKYLRVEPEDHHFLLTEPPLNPPENRENTAEIFFESFNCAGLYIAVQAVLALAASWTSSKVQDRSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRDITYFVQSLLRDRG---EPDSSLKTAQEIKEEYCYVCPDIVKEFAKYDRDRSRFLKHTITQPGGRQVTVDVGYERFMA 298
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.571e-35 Identity = 81/196 (41.33%), Postives = 112/196 (57.14%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT-------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFVAQ 611 P++HG + NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +PI EGY + +I + +AGRD++ + +I+ ER EI + +KE+ +YV D +E S PD I TI A+ V + Sbjct: 78 PVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSKNAEKTLTGTVIDSGDGVTHVIPISEGYVIGSSIKHIPIAGRDISSYVQQIMREREPNIPPAESLEIAKRVKEQYSYVCPDIVKEFGKYDSE---------PDKWIKTINAQDSVTK 264
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.276e-34 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 3 Query: 33 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE 515 ++KYP+ HG+V +WD ME+ + LR PE+H LLTE PLN NRE +IMFETFNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGR++T + +L ER E + +KEK Y+ D +E Sbjct: 73 SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKE 241
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3B_MOUSE (Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 39 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE 515 K+PI HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L ER E + +KEK Y+ D +E Sbjct: 75 KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVRE 241
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP3B_HUMAN (Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.176e-34 Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 39 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE 515 K+PI HGI+ +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L ER E + +KEK Y+ D +E Sbjct: 75 KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKE 241 The following BLAST results are available for this feature:
BLAST of CX294831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294831 ID=CX294831; Name=CX294831; organism=Citrus clementina; type=EST; length=662bpback to top |