CX294831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25 Identity = 72/232 (31.03%), Postives = 122/232 (52.59%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YMFTTTAEREIVRD-------MKEKLAYVA------------LDYEQELETAKSSSSVEK--------NYELPDGQIITIGAERF-VAQSSVQPSLIE 638 P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG ++ ++ E YM A +E VR+ KEKL V+ D++ + S E+ +YE+P+G GAER + + PS ++ Sbjct: 84 PLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMI---AAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVK 312
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25 Identity = 72/232 (31.03%), Postives = 122/232 (52.59%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YMFTTTAEREIVRD-------MKEKLAYVA------------LDYEQELETAKSSSSVEK--------NYELPDGQIITIGAERF-VAQSSVQPSLIE 638 P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG ++ ++ E YM A +E VR+ KEKL V+ D++ + S E+ +YE+P+G GAER + + PS ++ Sbjct: 84 PLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMI---AAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVK 312
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25 Identity = 72/232 (31.03%), Postives = 122/232 (52.59%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YMFTTTAEREIVRD-------MKEKLAYVA------------LDYEQELETAKSSSSVEK--------NYELPDGQIITIGAERF-VAQSSVQPSLIE 638 P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG ++ ++ E YM A +E VR+ KEKL V+ D++ + S E+ +YE+P+G GAER + + PS ++ Sbjct: 84 PLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMI---AAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVK 312
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25 Identity = 72/232 (31.03%), Postives = 121/232 (52.16%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YMFTTTAEREIVRD-------MKEKLAYVA------------LDYEQELETAKSSSSVEK--------NYELPDGQIITIGAERF-VAQSSVQPSLIE 638 P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE +++PA ++ AVL+ +A+GR+TG++LDSG + +P+++GY L I++ LAG +T ++ E YM A +E VR+ KEKL V D++ + S+ E+ +YE P+G GAER + + PS ++ Sbjct: 87 PLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMI---ASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVK 315
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24 Identity = 73/199 (36.68%), Postives = 105/199 (52.76%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERF-VAQSSVQPSLI 635 P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ + L + + + V +KE+ A A D Q A SS + + LPDGQ+ITI ER+ V ++ QP ++ Sbjct: 53 PVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSN--SSVNIDISDVERLKEQYACCAED--QMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHIL 247
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24 Identity = 73/199 (36.68%), Postives = 105/199 (52.76%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERF-VAQSSVQPSLI 635 P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ + L + + + V +KE+ A A D Q A SS + + LPDGQ+ITI ER+ V ++ QP ++ Sbjct: 53 PVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSN--SSVNIDISDVERLKEQYACCAED--QMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHIL 247
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23 Identity = 68/218 (31.19%), Postives = 118/218 (54.13%), Query Frame = 3 Query: 36 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS-VEKNYELPDGQIITIG-------AERFVAQSSVQPSLI 635 ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI R+DL G+ T+ L ++++ R E +V D KEKL +V+LD ++L A++ ++ ++ Y LPDG T G A+RF++ S + ++ Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRS--INVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLSEKESVVV 276
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.483e-22 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 Query: 42 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 176 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18 Identity = 53/189 (28.04%), Postives = 97/189 (51.32%), Query Frame = 3 Query: 30 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIG 590 L K P E G + NWD + +W + FYN + +LLT+ PL + Q++FE + + A L ++SG+ +V+D+G +H P+ G I R+++ G+ +T+ L + ++ R Y E I+ +KEK+ +V+ D++++L+ AK + S++ Y LPD + +G Sbjct: 47 LVFKRPSEKGQLINWDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAANLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFRHY--NMMDETYIINRVKEKVCFVSQDFDKDLDLAKKTKSLQVEYALPDYKTTKLG 233
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18 Identity = 57/192 (29.69%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 30 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS---VEKNYELPDG 572 +TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++FE ++ VA +++ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++++ R E ++ D KEKL +V+LD +L A+ SS+ +Y LPDG Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRS--LNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249 The following BLAST results are available for this feature:
BLAST of CX294831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294831 ID=CX294831; Name=CX294831; organism=Citrus clementina; type=EST; length=662bpback to top |