CX294831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.501e-14 Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY---ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKN 554 P + V+NW+ E+I +TF++ L V P+ +P+LLTE ++ R QI+FET+NVP + I ++ S Y SG TG+V+ G ++ +P+ +G + R++ G D L ++ + F T M + YV+ +Y++++E + +++ N Sbjct: 99 PFDGPFVTNWNLTEEILDYTFHH-LGVVPDNGIPNPILLTERLATVQSQRTNWYQILFETYNVPGVTFGIDSLFSFYNYNPSGNKTGLVISCGHEDTNVIPVVDGAGILTDAKRINWGGHQAVDYLNDLMALKYPYFPTKMSYLQYETMYKDYCYVSRNYDEDIEKILTLENLDTN 273
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14 Identity = 53/226 (23.45%), Postives = 98/226 (43.36%), Query Frame = 3 Query: 54 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKI--------------------LTERGYMFTTTAE-----------------------REIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERF 602 +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE +VPA Y+ QAV +A+ ++T +++D G + P+ +G + I + LAG L + ++ + + G M +A+ R ++ + KE + V + + AK+SS K +E PDG G ERF Sbjct: 74 NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEFPPHYRIARKSVAIQQSGNMANGSADAVKPAVLYPPIQDLTSSYEIFQKRRVIEEWKESVLDV---LDTPFDEAKASSRNPKPFEFPDGVTHKFGQERF 296
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14 Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 30 LTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKS---SSSVEKNYELPD 569 + + P E G++ NWD IW F + L + P E +L+TE N E Q++FE F + + A L LY S + IV+D G +H VPI +G + + R+D+ G+ LT+ L +++ R + + +V ++E YV+L+++ +LET K+ + + + Y LPD Sbjct: 58 IVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFR--QWNMIDQTHVVNSVREACGYVSLNWKGDLETCKAKPRKNPIIQEYVLPD 247
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP4_USTMA (Actin-related protein 4 OS=Ustilago maydis GN=ARP4 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14 Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 135 EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYEL 563 EHP+LLTE N + +REK+T++ FET PA Y+A ++VLS +A+G+ + +V+D G T+PI +G+ L I R + G + AL+ L RG F + +++ + E + +SS ++Y + Sbjct: 181 EHPLLLTEPAWNSRESREKLTELAFETLGSPAFYLANRSVLSSFAAGKPSSLVIDVGSTNVSTIPIVDGFILRKGIYRHNNGGEAINRALLYSLHHGRGATFAGVTPQYVIKSRSSVDPGTPANVVLRQERVQGASSSFRSYHI 324
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 52/191 (27.23%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAK---SSSSVEKNYELPDGQIITIG 590 P + G + NWD ++W + F E+ +V + +++TE N + +E M +I+FE + A+ LS + R I++DSG +H VP AI+R+++ G+ LT+ L +I++ R E ++ +KE + YV+ D+ ++++ AK ++V +Y LPD I G Sbjct: 59 PFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKG 247
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 52/191 (27.23%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 45 PIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAK---SSSSVEKNYELPDGQIITIG 590 P + G + NWD ++W + F E+ +V + +++TE N + +E M +I+FE + A+ LS + R I++DSG +H VP AI+R+++ G+ LT+ L +I++ R E ++ +KE + YV+ D+ ++++ AK ++V +Y LPD I G Sbjct: 59 PFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKG 247
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP5_CHICK (Actin-related protein 5 OS=Gallus gallus GN=ACTR5 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13 Identity = 50/182 (27.47%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 36 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER--GYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKN 554 L+ P + + + E ++ H F L VA + +HP++LTEA NP +R+ M++++FE + VP + + ++ S Y + R +G+V+ SG +H +P+ EG R++L G L ++L + G+ T R + ++ + +Y+A DY +EL+ +S E N Sbjct: 96 LRSPFDRNVPVQLELQELLFDHVF-QRLGVASQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYQVPKVSYGVDSLYSFYHNRRQNWPCSGLVISSGYQCTHILPVLEGRLDAKNCKRINLGGCQAAVYLQRLLQLKYPGHFAAITLSR--MEEILHEHSYIAEDYTEELQKWRSPEYYENN 274
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 102 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERF-VAQSSVQPSL 632 T Y ++V P P+++ A + K R+ + ++F+ NVPA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R F + VR +KEKL YVA DYE A+ + + E+ T+ ERF A+ QP + Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYE-----AEKRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQI 367
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 102 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERF-VAQSSVQPSL 632 T Y ++V P P+++ A + K R+ + ++F+ NVPA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R F + VR +KEKL YVA DYE A+ + + E+ T+ ERF A+ QP + Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYE-----AEKRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQI 367
BLAST of CX294831 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 51/197 (25.89%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 51 EHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY-----ASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSS---SVEKNYELPDGQIITIGAER 599 + G + NW + +W + F + + + E +++TE +N ++ +E +I+FE + V +Y A L+ + + RTT I++D G +H VP G + I R+D+ G+ LT+ L ++++ R E +V +KE + +VA D++Q ++ S V +Y LPD + G R Sbjct: 64 QRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVR 258 The following BLAST results are available for this feature:
BLAST of CX294831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294831 ID=CX294831; Name=CX294831; organism=Citrus clementina; type=EST; length=662bpback to top |