CX294850

Overview
NameCX294850
Unique NameCX294850
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.530e-50
Identity = 96/167 (57.49%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   45 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVIED 545
            M+NP+VFFD+       GR+VMEL ADV P+TAENFRALCTGEKG G       YKG +FHR+IP FM Q            +SIYG KF DENF +KHTGPG LSMANAGPNTNGSQFFI T K  WLDGKHVVFG+V +G  V++++E++GS +G     ++I++
Sbjct:    1 MSNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDN 160          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.585e-49
Identity = 102/167 (61.08%), Postives = 114/167 (68.26%), Query Frame = 3
Query:   45 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVG-SESGRTSHTVVI 539
            M NPRVFFDI +     GR+V+ELFAD  PKTAENFRALCTGEKGIG  S  PLHYKGS FHRII  FMCQ            ESIYG  F DE+F  KH   G+LSMAN GPNT  SQFFI T+ TP LDGKHVVFG+VV GY+V++ MEN    +  R  H V+I
Sbjct:    1 MINPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMI 167          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.114e-49
Identity = 96/173 (55.49%), Postives = 118/173 (68.21%), Query Frame = 3
Query:   39 EKMTNPRVFFDILIGKMNKGRVVMEL----FADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVIED 545
            E    PRV+FDI IG    GR+ +EL    F DV PKTAENFRALCTGEKG+G   KPL YKGS FHR+I  FM Q            ESIYG KF DENF++KH  P +LSMAN+GP TNGSQFFI T  TP LDGKHVVFG+V++G S+++ +EN+ +++ + +  V I D
Sbjct:    3 ETQRRPRVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPTQADKPTTDVTIVD 175          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.114e-49
Identity = 97/151 (64.24%), Postives = 110/151 (72.85%), Query Frame = 3
Query:   63 FFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESG 515
            FFD+ IG    GR++MELF DV PKTAENFRALCTGEKGIG SGK + Y+GS FHR+IP FM Q            ESIYG KFADENF  KHT PG+LSMANAGP TNGSQFFI T  TP LDGKHVVFGKVV+G  V++ +E   ++ G
Sbjct:    5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRG 154          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.043e-48
Identity = 98/165 (59.39%), Postives = 113/165 (68.48%), Query Frame = 3
Query:   54 PRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRT-SHTVVIED 545
            P VFFDI IG    GRV   L++D+ PKTAENFRALCTGEKG+G SGKPL YKGS FHR+I  FMCQ            ESIYG KF DE F + H+ P +LSMANAGPNTNGSQFFI    TP LDGKHVVFG+V+ G SV++ +EN  + +G      VVI D
Sbjct:    5 PIVFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIAD 169          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.323e-48
Identity = 93/166 (56.02%), Postives = 113/166 (68.07%), Query Frame = 3
Query:   48 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVIED 545
            +NP+V+ DI IG    GR+ M L +DV P TAENFR LCT EKG G       +KGS+FHRIIP FMCQ            +SIYG KF DENF +KHTGPG+LSMAN+GPNTNGSQFF+   KT WLDGKHVVFG++ DG  V++ +E  GS+ G+    V+I D
Sbjct:  138 SNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISD 296          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.323e-48
Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3
Query:   39 EKMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVI 539
            +    PRVFFDI IG    GR+ +EL   + PKTAENFRALCTGEKG+G  GKPLH+KGS FHR+I  FM Q            ESIYG KF DENF++KH  P +LSMAN+GP TNGSQFFI T  TP LDGKHVVFG+V++G SV++ +EN+ +++ +    V I
Sbjct:    3 DSQRRPRVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTI 167          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.176e-48
Identity = 96/163 (58.90%), Postives = 110/163 (67.48%), Query Frame = 3
Query:   51 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVI 539
            NP+VFFDI IG  + GR+VM L ADV PKTAENFR LCT E+G G       YKG +FHR+IP FMCQ            +SIYG KF DENF +KH   G LSMAN+G NTNGSQFFICT KT WLD KHVVFG V+ G  V++ ME  GS+SG  S  +VI
Sbjct:  138 NPQVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVI 293          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 5.176e-48
Identity = 101/163 (61.96%), Postives = 110/163 (67.48%), Query Frame = 3
Query:   57 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVIED 545
            + FFDI IG    GR+V  LF DV PKT ENFRALCTGEKG G       YKGS FHRIIP FMCQ            +SIYG KF DENF  KH+ P +LSMANAG NTNGSQFFI T  T WLDGKHVVFG+V  G  V+KDME VGS SG+TS  V+I D
Sbjct:    4 KCFFDISIGGKPAGRIVFALFDDV-PKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSGKTSQEVLITD 158          
BLAST of CX294850 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.176e-48
Identity = 94/160 (58.75%), Postives = 110/160 (68.75%), Query Frame = 3
Query:   63 FFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXXESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMENVGSESGRTSHTVVIE 542
            FFD++      GR+V +LF DV PKTA NFRALCTGEKG G       Y GSTFHR+IP FM Q            +SIYG KF DENF +KH  PG+LSMANAGPNTNGSQFFI T  TPWLDGKHVVFG+V +G  V+K +E++GS SG T   +VI+
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVID 157          
The following BLAST results are available for this feature:
BLAST of CX294850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
PPIA1_RHIOR5.530e-5057.49Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
CYP11_RHIOR3.585e-4961.08Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPID_ASPFU6.114e-4955.49Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CYPX_USEUD6.114e-4964.24Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPID_AMAMU1.043e-4859.39Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPIE_BOVIN2.323e-4856.02Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPID_ASPOR2.323e-4856.29Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIE_DROME5.176e-4858.90Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIA_ECHGR5.176e-4861.96Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYPH_SCHPO5.176e-4858.75Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05056F11SK PhIFruit1 Citrus clementina cDNA clone C05056F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294850 ID=CX294850; Name=CX294850; organism=Citrus clementina; type=EST; length=547bp
TCCAGGTCGAATTACAGCAAAAGGCTTTTGATTGGATAGAAAAAATGACG
AATCCAAGGGTTTTCTTTGACATTCTGATTGGAAAGATGAACAAGGGGCG
AGTTGTGATGGAGCTATTTGCTGACGTCACCCCAAAAACTGCTGAAAACT
TCCGTGCTCTCTGCACTGGTGAGAAAGGGATTGGAACGTCTGGGAAGCCA
CTACACTATAAGGGCTCGACATTTCACCGCATAATCCCTAACTTCATGTG
TCAGGGGGGAGATTTCACTCGGGGAAATGGAACTGGAGGAGAATCGATAT
ATGGGATGAAGTTTGCTGATGAGAACTTCAAGATGAAGCATACTGGGCCT
GGAATTCTGTCAATGGCTAATGCTGGACCTAACACTAATGGTTCACAGTT
TTTTATATGCACTCAGAAAACACCATGGCTTGATGGCAAACATGTTGTGT
TTGGGAAAGTGGTAGACGGTTACAGTGTCATCAAGGATATGGAGAACGTG
GGTTCTGAGAGTGGGAGGACTTCGCATACAGTTGTGATTGAAGACTG
back to top