CX294887

Overview
NameCX294887
Unique NameCX294887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX294887_ssr239 microsatellite CX294887_ssr239:239..250. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15047 contig Ccv1_Contig15047:1..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14
Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATN 546
            HR+L  L+ +YG ++LL  G+  ++VVSS + A+EVL T   +F +R R+         G+D+VF  YGE+WR+M+ +  +   TNK+V+      EDE   ++E ++K   ++++
Sbjct:   54 HRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSS 169          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 41/111 (36.94%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  193 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK 525
            L H+ L DL+KK+G V+ LR+G   +VV+SS + A+E L T  +E  SR   +   +F+  G+D+ F VYG+ WR++R++    FF+ K VQ  ++  E+E   +++ +K+
Sbjct:   51 LLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKE 161          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 43/145 (29.66%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 633
            HR+L  L++KYG V+LL +G + ++V SS D A+++L T    + +R +  + D      +D+ F+ +GE+W ++R I+ +   +NK VQ  R   E+E A ++E +++  +A+   I L   L  +  N   R+   R ++ ++
Sbjct:   57 HRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASV--INLGEHLCFLTNNITSRVALGRTYDERE 199          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 46/176 (26.14%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  109 KLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            +L GK+              N  Q+G    HR+L DL+++YG ++LL +G+  +++VSS D A+E+L T    F +R R+ +        +D+    YGE+WR+M+ +  +   +NK+V+  R   E+E   ++  ++K      N   + + L+ +  + + R+   R++  + D
Sbjct:   22 QLSGKKGKTPPSPPGLPLIGNLHQLGRH-THRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFN---VSKVLECLTNDVICRVALGRKYGGETD 193          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 44/147 (29.93%), Postives = 80/147 (54.42%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY-RIMFDRRFESQDD 636
            HR+L  L+ +YG ++LL  G+  +++VSS D A ++L T  V   +R +  V D     G+D+ F  YGE+W++M+ I      +NK+V+  +   EDE   ++E V+     +    V   +L + + N++  R    R++ S++D
Sbjct:   54 HRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKED 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14
Identity = 42/147 (28.57%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY-RIMFDRRFESQDD 636
            HR+L  L+ +YG ++LL  G+  +++VSS D A +V+ T  +   +R +  V D     G+D+ F  YGE+WR+M+ I       NK+V+      E+E  R++E ++K   +++   V   ++ + + N++  R+   R++  + D
Sbjct:   53 HRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKKD 199          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.230e-14
Identity = 43/146 (29.45%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            HR+L  L+ +YG ++LL  G+  ++VVSS + A++VL T    F SR R+ +F+       D+    YGE+WR+M+ +  +  F+NK+V+  R   E+E + ++E ++K      N   L + L  +  + + ++   R++  + D
Sbjct:   52 HRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVN---LSKILVSLTNDVICKVALGRKYGGETD 194          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 1
Query:  208 LSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNG 549
            L DLA KYG V+ LR GQ + VV+SSP  A+EVL  + V F SR   +V +IF     D+ F  YG +WR +R++ TV   + K+V+Q     + E   +V ++    EAA  G
Sbjct:   60 LRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNI----EAAAGG 169          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  187 DDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            D L HR L++LAKKYG +  LRMG  ++  VSSP+ A++VL  Q   F +R   +     T    DM F  YG  WR+MR++  +  F+ K  +    +  DE  ++V  V  +     N   +  ++  +  N  YR  F    E   D
Sbjct:   57 DQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWA-SVRDEVDKMVRSVSCNVGKPIN---VGEQIFALTRNITYRAAFGSACEKGQD 202          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14
Identity = 45/154 (29.22%), Postives = 78/154 (50.65%), Query Frame = 1
Query:  178 QVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNV-VFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            Q+     H  L DLAKKYG ++ L++G+ + +V SSP  A+E+  T  + F  R  N+  F I +    DMV + YG +WR++R+I  +   + K VQ  R   E+E    ++ +        N   L + + L++Y    R  F  + ++ ++
Sbjct:   41 QLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRIN---LSKEISLLIYGITTRAAFGEKNKNTEE 191          
The following BLAST results are available for this feature:
BLAST of CX294887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
C71AD_ARATH1.797e-1434.48Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH2.347e-1436.94Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME2.347e-1429.66Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71AP_ARATH3.066e-1426.14Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH3.066e-1429.93Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH4.004e-1428.57Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH5.230e-1429.45Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ6.830e-1440.35Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C84A1_ARATH8.920e-1432.00Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71DC_CATRO8.920e-1429.22Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionC05057B02SK PhIFruit1 Citrus clementina cDNA clone C05057B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294887 ID=CX294887; Name=CX294887; organism=Citrus clementina; type=EST; length=637bp
CTCGTGCCGAATTCGGCACGAGGGTTAATCGTAAAGATGGATCTCCTCTT
GCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTA
CCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGCCCCCTC
CCCGTCCCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTTGAACCA
TCGGAACCTCTCCGACTTAGCCAAGAAATATGGAGATGTCCTCCTCCTCC
GCATGGGCCAGCGCAACCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAG
GAGGTTCTGCACACGCAGGGAGTGGAGTTCGGATCACGAACGAGGAACGT
CGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTCACAGTGT
ACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTTTCTTC
ACGAACAAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGC
TAGAGTCGTTGAGGATGTTAAGAAGGACCCCGAGGCGGCGACCAATGGGA
TCGTCTTGAGGAGGCGGCTGCAGCTTATGATGTACAACAACATGTACAGG
ATTATGTTTGATAGAAGATTCGAGAGTCAGGATGATC
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