CX294887

Overview
NameCX294887
Unique NameCX294887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX294887_ssr239 microsatellite CX294887_ssr239:239..250. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15047 contig Ccv1_Contig15047:1..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 42/154 (27.27%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  175 LQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            L +   L  + L  L +KYG ++ L++G+ + +VVSSP  A E++ T  V F  R + +          D+ F  YG++WR++R+I T+   + K VQ      +DE  ++++ +     +A + I L  +L  ++   + R  F +  + QD+
Sbjct:   49 LALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIH---SSAGSPIDLSGKLFSLLGTTVSRAAFGKENDDQDE 199          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 41/143 (28.67%), Postives = 68/143 (47.55%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRR 618
            H +L+ +AKKYG ++ L++G   + V S+PD AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       +V+   L   M N + ++M  +R
Sbjct:   54 HVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKR 192          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  169 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 633
            N  Q+G+ L HR+L  LA++YG V+LL  G   + VVSS + A+EVL T  ++  SR + V   + +   +D+ FT YG  W+  R+      F  K VQ  R   E+E   +V+ +  +     + + L + L  +  + ++R+   + F   D
Sbjct:   42 NLHQIGE-LPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL-SESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESD 194          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 41/146 (28.08%), Postives = 71/146 (48.63%), Query Frame = 1
Query:  190 DLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWED-EAARVVEDVKKDPEAATNG--IVLRRRLQLMMYNNMYRIMFDRR 618
            ++ H   +++AKKYG V+ L++G   L + S+PD AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW D     +   +K   E++ N   +++   L   M N + +++  RR
Sbjct:   59 NMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALE----NWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRR 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 42/143 (29.37%), Postives = 68/143 (47.55%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRR 618
            H  L+ +AKKYG ++ L++G   +VV S+P+ AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       IV+   L   M N + ++M  +R
Sbjct:   57 HVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKR 195          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11
Identity = 45/149 (30.20%), Postives = 68/149 (45.64%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTR----NVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 633
            HR    L++KYG V  L  G R +VVVSS    ++      V   +R R      +F  +T  G     T YGEHWR +RRI  +   +N  +        DE  R++  +  D       + L  RL  M +NN+ R++  +R+  +D
Sbjct:   53 HRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGS----TSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGED 197          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11
Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 1
Query:  169 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATN--GIVLRRRLQLMMYNNMYRIMFDRRFESQD 633
            N  Q+G+ L HR+L  LA++YG V+LL  G   + VVSS + A+EVL T  ++  SR + V   + +   +D+ FT YG  W+  R+      F  K VQ  R   E+E   +V+ +    E+A N   + L + L  +  +  +R+   + F   +
Sbjct:   42 NLHQIGE-LPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLS---ESAVNRSPVDLSKSLFWLTASIFFRVALGQNFHESN 194          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRR 618
            H +L+ +AKKYG ++ L++G   +VV S+PD AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       +V+   L   M N + +++  +R
Sbjct:   54 HVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMFDMSREGERVVVAEMLTFAMANMIGQVILSKR 192          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 40/137 (29.20%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  199 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMF 609
            HR++  L++ YG ++ L+ G  + VV S+P+  KEVL T  VE  SR         T   +D+ F+ Y ++WR++R++  V  +T K VQ  +   ++E A +V+ +K+   +    + L ++L  +  + + R+ F
Sbjct:   50 HRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQ-AASLEKPVNLNKKLMKLSGSVICRVAF 185          
The following BLAST results are available for this feature:
BLAST of CX294887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
C71D8_SOYBN1.860e-1127.27Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C75A1_PETHY2.429e-1128.67Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71BJ_ARATH3.173e-1130.32Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C75A4_GENTR4.144e-1128.08Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C75A2_SOLME4.144e-1129.37Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C81E1_GLYEC5.412e-1130.20Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71BK_ARATH5.412e-1131.21Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY7.068e-1128.67Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71BC_ARATH9.231e-1129.20Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05057B02SK PhIFruit1 Citrus clementina cDNA clone C05057B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294887 ID=CX294887; Name=CX294887; organism=Citrus clementina; type=EST; length=637bp
CTCGTGCCGAATTCGGCACGAGGGTTAATCGTAAAGATGGATCTCCTCTT
GCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTA
CCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGCCCCCTC
CCCGTCCCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTTGAACCA
TCGGAACCTCTCCGACTTAGCCAAGAAATATGGAGATGTCCTCCTCCTCC
GCATGGGCCAGCGCAACCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAG
GAGGTTCTGCACACGCAGGGAGTGGAGTTCGGATCACGAACGAGGAACGT
CGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTCACAGTGT
ACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTTTCTTC
ACGAACAAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGC
TAGAGTCGTTGAGGATGTTAAGAAGGACCCCGAGGCGGCGACCAATGGGA
TCGTCTTGAGGAGGCGGCTGCAGCTTATGATGTACAACAACATGTACAGG
ATTATGTTTGATAGAAGATTCGAGAGTCAGGATGATC
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