CX294890

Overview
NameCX294890
Unique NameCX294890
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 335.109 bits (858), Expect = 1.763e-91
Identity = 161/210 (76.67%), Postives = 185/210 (88.10%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTR-VPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GI+PE+I ALHLIP+E+SLKIV+KIEAGERF VY+V+PMWPEG P SGSVQAILDWQRRTM+MMY D+  AL AK I  DPR+YLTFFCLGNREVK +GEYEPA RP D +DY +AQ+ARRFMIYVH+KMMIVDDEYII+GSANINQRSM+G RD+EIAMG +QP HL+T+ + ARGQIHGFRMSLWYEHLGML D FL PES ECV++V
Sbjct:  542 GIRPEDIEALHLIPREISLKIVNKIEAGERFAVYVVLPMWPEGPPASGSVQAILDWQRRTMEMMYYDIAVALEAKRINADPRDYLTFFCLGNREVKLNGEYEPAGRPLDGTDYAKAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPCHLNTKGLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRV 751          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 6.948e-80
Identity = 148/210 (70.48%), Postives = 170/210 (80.95%), Query Frame = 2
Query:    5 IKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            I   EINAL LIPKE+SLKIVSKIEAGERF+VYIV+P+WPEG P S SVQAILDWQRRTM+MMY D++ ALR KG+  +PR+YLTFFCLGNRE  + GEY P E+PE +SDY RAQE+RRFMIYVH+KMMIVDDEYIIIGSANINQRSM+G RDTEIAMG YQP HL +    R  GQI  FR+SLW EHL +  + F  PES EC++ V
Sbjct:  542 INLNEINALQLIPKEISLKIVSKIEAGERFSVYIVIPLWPEGKPGSASVQAILDWQRRTMEMMYTDIIIALRKKGLDANPRDYLTFFCLGNREKGKVGEYLPPEKPEANSDYARAQESRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMV 751          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.362e-59
Identity = 115/210 (54.76%), Postives = 148/210 (70.48%), Query Frame = 2
Query:   14 EEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMED--PRNYLTFFCLGNRE-VKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            ++I A +LIP E++LKI  KI A ERF  YIV+PMWPEG P   + Q IL WQ +TM MMY  +  AL   G+ ++  P++YL FFCLGNRE V  + E        +++     +++RRFMIYVH+K M+VDDEY++IGSANINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+ +LDD F++PES  CV+KV
Sbjct:  641 KDIGANNLIPMEIALKIADKIRAKERFAAYIVIPMWPEGVPTGAATQRILYWQHKTMQMMYGTIYNALVEAGLEDEYSPQDYLNFFCLGNREMVNGNNESGTGSASNENTPQGLCRKSRRFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKV 850          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 1.362e-59
Identity = 116/211 (54.98%), Postives = 147/211 (69.67%), Query Frame = 2
Query:   14 EEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIME--DPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLR--AQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            ++I A +LIP E++LKI  KI A ERF  YIV+PMWPEG P   + Q IL WQ +T+ MMY+ + +AL   G+     P++YL FFCLGNRE+    +      P      LR  ++++RRFM+YVH+K M+VDDEY++IGSANINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+  LDD F QPES ECV+KV
Sbjct:  692 KDIGADNLIPMEIALKIAEKIRANERFAAYIVIPMWPEGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREMVDGIDNSGTGSPRQMQTLLRPLSRKSRRFMVYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKV 902          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 4.383e-58
Identity = 112/217 (51.61%), Postives = 154/217 (70.97%), Query Frame = 2
Query:   14 EEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGI--MEDPRNYLTFFCLGNREVKRSGEYE--------PAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            +++ A +LIP E++LKI +KI A E F  YIV+PMWPEG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLGNREV      +        P + P+ ++  ++A ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP+H   +  +  RGQI G+RMSLW EHLG L+  F +PE+ ECV++V
Sbjct:  575 KDLGANNLIPMEIALKIANKIRARENFAAYIVIPMWPEGAPTSKPIQRILYWQHKTMQMMYQTIYKALLEVGLDGQLEPQDFLNFFCLGNREVGTREVPDGTVNVYNCPRKPPQPNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRV 791          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.665e-57
Identity = 112/217 (51.61%), Postives = 153/217 (70.51%), Query Frame = 2
Query:   14 EEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGI--MEDPRNYLTFFCLGNREVKR--------SGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            + + A +LIP E++LKI +KI A E+F  YIV+PMWPEG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLG REV          S    P + P+ ++  ++A ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP+H   +  +  RGQI G+RMSLW EHLG L+  F +PE+ ECV++V
Sbjct:  585 KNLGANNLIPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDGQLEPQDFLNFFCLGTREVGTREVPDGTVSVYNSPRKPPQLNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRV 801          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.405e-56
Identity = 112/201 (55.72%), Postives = 138/201 (68.66%), Query Frame = 2
Query:   32 HLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLG---MLDD-TFLQPESSECVK 622
            +LIP E++LKI +KI A ERF VYIV+PMWPEG PES +V+ IL W R TM MMY+ + +A+   G    PR+YL FFCL NRE KR GE+E    P   + Y  AQ  RRFM+YVH+K+MIVDD YI+IGSANINQRSM+G RDTEIA+G YQ     T      +I  +R+SLWYEH G     DD +  +PES ECV+
Sbjct:  499 NLIPVEIALKIAAKIRARERFAVYIVIPMWPEGPPESETVEEILHWTRETMSMMYQIIGEAIWEVGDKSHPRDYLNFFCLANREEKRDGEFEAVSSPHQKTHYWNAQRNRRFMVYVHSKLMIVDDTYILIGSANINQRSMDGCRDTEIAIGCYQ-----TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVR 694          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.141e-56
Identity = 110/216 (50.93%), Postives = 150/216 (69.44%), Query Frame = 2
Query:   14 EEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIME--DPRNYLTFFCLGNREVK-------RSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            +++ A +LIP E++LKI +KI A E+F  YIV+PMWPEG P S  +Q IL WQ +TM MMY+ + +AL   G+    +P+++L FFCLG REV         S    P      ++  ++A ++RRFMIYVH+K M+VDDE+++IGSANINQRS+EG RDTEIAMGGYQP++      +R  GQI G+RMSLW EHLG L+  F +PE+ ECV++V
Sbjct:  578 KDLGANNLIPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDSQFEPQDFLNFFCLGTREVPVGTVSVYNSPRKPPQPNANANAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRV 793          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.535e-55
Identity = 116/207 (56.04%), Postives = 141/207 (68.12%), Query Frame = 2
Query:   17 EINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHL---STRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            +  A +LIP EL+LKIVSKI A ERF VY+V+P+WPEG P+SG VQ IL WQ +TM MMY  + + L+A      P +YL F+CLG RE  +  +  PA      SD    Q   RFMIYVHAK MIVDDEY+++GSANINQRSM G +DTEIAMG YQP H      R P RGQ++G+RMSLW EHLG   D F++P   EC+KKV
Sbjct:  602 DAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHPLDYLNFYCLGKRE--QLPDDMPATNGSVVSDSYNFQ---RFMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHP-RGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKV 802          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLD_PHYIN (Phospholipase D OS=Phytophthora infestans GN=PLD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 62/186 (33.33%), Postives = 93/186 (50.00%), Query Frame = 2
Query:   59 KIVSKIEAGERFTVYIVVPMWP--EG---FPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAM----GGYQPYHLSTRVPARG-QIHGFRMSLWYEHLGMLDD 586
            +I   ++  E+F VY+V+P+ P  EG     E  ++ A++ WQ  T+      + +AL  KG+   P NY+ FF L    +  +G                   A    IY+H+K+MI DD   I+GSANIN RSM G RD+EIA+      Y+   ++ +   RG      R+ L+ EHLG+ DD
Sbjct: 1162 RIERAVQRDEKFRVYVVMPLLPAFEGNIRSHELTNLHAVMHWQFATICRGRYSLFEAL--KGVTNHPENYVAFFGLRKYGIMPNGC------------------AATEQIYIHSKLMIADDRCAILGSANINDRSMNGDRDSEIALVIEDMQYEDGVMNEKPYRRGVAASKLRLQLFREHLGLADD 1327          
The following BLAST results are available for this feature:
BLAST of CX294890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PLDA2_ORYSJ1.763e-9176.67Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDZ1_ARATH6.948e-8070.48Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDB2_ARATH1.362e-5954.76Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDB1_ARATH1.362e-5954.98Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDG2_ARATH4.383e-5851.61Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH1.665e-5751.61Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDE1_ARATH2.405e-5655.72Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]
PLDG1_ARATH3.141e-5650.93Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH4.535e-5556.04Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLD_PHYIN5.420e-1633.33Phospholipase D OS=Phytophthora infestans GN=PLD P... [more]

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Properties
Property NameValue
Genbank descriptionC05057B07SK PhIFruit1 Citrus clementina cDNA clone C05057B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294890 ID=CX294890; Name=CX294890; organism=Citrus clementina; type=EST; length=630bp
TGGCATTAAGCCTGAGGAAATTAATGCTTTGCATCTGATTCCAAAGGAGC
TCTCACTTAAGATTGTTAGTAAGATTGAGGCTGGGGAGAGATTTACCGTA
TATATTGTTGTCCCAATGTGGCCAGAGGGGTTTCCAGAGTCTGGTTCAGT
TCAGGCAATATTAGATTGGCAGAGAAGGACAATGGATATGATGTATAAGG
ATGTTGTTCAGGCTCTTAGAGCAAAGGGCATTATGGAAGATCCCAGGAAC
TATTTGACATTCTTCTGCCTTGGGAATCGGGAGGTGAAGAGGAGTGGTGA
ATATGAACCTGCAGAAAGGCCGGAGGATGATTCAGACTATCTTAGAGCTC
AGGAAGCTCGACGCTTCATGATCTACGTTCATGCCAAGATGATGATTGTT
GATGACGAATACATTATAATTGGATCTGCCAACATCAACCAGCGATCAAT
GGAGGGTGCCAGGGACACTGAGATAGCCATGGGAGGCTACCAACCATATC
ATTTGTCAACCAGGGTGCCAGCACGAGGCCAGATACACGGCTTCCGTATG
TCACTATGGTACGAGCACCTAGGCATGCTCGATGACACCTTCCTCCAGCC
AGAAAGTAGCGAATGTGTTAAGAAGGTAAC
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