CX294892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.225e-22 Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 193 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKSFSLAFIDLMMVYV 612 MAQ EDWYK +PI+T+ Y+T +VT+V L ++ P L L+ LV Y+FWRL TNF F+ + R+ +LLEE+SFRGR+AD+L+M +FG+ L +++ + Y F I M++YV Sbjct: 1 MAQPFEDWYKNLPIVTKIYMTGCVVTSVSVYLGLVGPLRLYLNFPLVFGKYEFWRLFTNFFFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLL---LIMDAFLFYTKIVTKVLFLAPSIAFMVIYV 137
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 217 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGM 540 + Q+P +TR Y A ++TT L+++SPF L +P LV + +Q WRLIT FLFF RYC++LEE SFRGR ADF++M LFG +T +G + Sbjct: 10 FLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFFGPLGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSL 117
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.129e-19 Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 220 KQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKSFSLAFI 591 ++MP +TR Y A ++ T L+ ++PF+L + L+++ YQFWRLIT+F FF RYC +LEE SFRGR ADF+YM LFGA + +L G + L A + L +I Sbjct: 9 EEMPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFFGSFGFSFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAVLM---ILSGIFVQILFLGQAFTIMLVYI 129
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15 Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 211 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKSFSLAFIDLMM 603 ++Y +P IT+ Y T TTV L +++P ++ L P LV+K +Q WRLITN F ARY LE+ F RTADFL+M++FG+ T+L+ +IP+ F SL F+ L + Sbjct: 6 EFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLFFLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSF----TLLVLSVIPFFWTPFL-GVSLVFMLLYL 131
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14 Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 211 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESF 564 ++Y +P I++ Y T TV C L I++P L L+ V K +Q WRL T+F F K ARY LE+ +F RTADFL+M++FGA ++L IP+L F Sbjct: 6 EYYNSLPPISKAYGTLCFFATVLCQLQILNPPFLALYYPFVFKKFQIWRLFTSFFFLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAI----SLLALSAIPFLDIYF 119
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 211 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESF 564 ++YK +P I++ Y T TTV L I+ P L L LV K ++ WRL+T+F F ARY +LE+ +F RTADFL+M++FGA ++L+ +IP + F Sbjct: 6 EYYKSLPPISKAYGTLCFFTTVLVQLQILHPLFLYLDYPLVFKKFEIWRLLTSFFFLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAI----SLLVLSIIPLFNSFF 119
BLAST of CX294892 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 211 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLS 555 ++YK +P I++ Y T TTV L I++P L L+ V K ++ WR+ T+F F ARY +LE+ +F RTADFL+M++FGA ++L+ +IP L+ Sbjct: 6 EYYKSLPPISKAYGTLCFFTTVLVRLHILNPLFLYLYYPRVFKKFEVWRIFTSFFFLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAI----SLLVLSVIPQLN 116 The following BLAST results are available for this feature:
BLAST of CX294892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294892 ID=CX294892; Name=CX294892; organism=Citrus clementina; type=EST; length=623bpback to top |