CX294898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORHD (Tyrosyl-tRNA synthetase OS=Borrelia hermsii (strain DAH) GN=tyrS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13 Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNVVILN 588 LE+RG L+ T+ S+ EK + Y G D T+ SLH+G+L+ + ++ R GH +AL+GG T ++GDPSGK + R L + +E N+ I++ I S+ I++ Sbjct: 8 LEKRGFLKQCTNLEALSVLMDREKMV-FYVGVDATSTSLHIGHLIPFMAMAHLQRQGHIPIALVGGGTTKIGDPSGKDVMRKILPKEDIEANVKAIKEQLLRIIDFSHGYIID 119
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_LACJO (Tyrosyl-tRNA synthetase OS=Lactobacillus johnsonii GN=tyrS PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNVVILN 588 ++++ L+ RG + T + + L +YCG DPT +SLH+G+L+ ++L F G+ V LIGG T +GDPSG+ ER + ++ N + +FG+ N I N Sbjct: 5 DILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKLTAQMKKLFGTENFEIRN 122
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_CAUSK (Tyrosyl-tRNA synthetase OS=Caulobacter sp. (strain K31) GN=tyrS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 241 VDTLERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFS 552 + TL+ RG + IT D L + A+ T Y GFD TA SLH+G+L+ I++L + GH+ + L+GG T +VGDP+GK R L + NI GI++ F+ Sbjct: 12 LQTLQARGYIHQITHPDELDAAAAGGIVT--AYIGFDATAPSLHVGSLIQIMMLRRLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIAANIAGIKQVFA 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_GLUOX (Tyrosyl-tRNA synthetase OS=Gluconobacter oxydans GN=tyrS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 325 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRK------TFSTIFGSSNVVILN 588 + Y GFDPTA+SLH+GN L I+ L + GH+ +AL+GG TA++GDPS + R + +T+ NI GI K TFS SS ++ N Sbjct: 34 ITAYVGFDPTADSLHVGNALTIMALRLLQKHGHRPIALMGGGTAKIGDPSFRDEARSLITNETIAHNIAGIEKSLRQFITFSDEDPSSGAILAN 127
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BRAJA (Tyrosyl-tRNA synthetase OS=Bradyrhizobium japonicum GN=tyrS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 241 VDTLERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 ++ L+ RG + + + L +LA+ E T Y G+D TA SLH+GN L +++L W + G++ + L+GG T VGDPSGK R + +E N IR F+ + G S+ V+L+ Sbjct: 9 LNILQERGFIHQCSDFEGLDALAAKGEAT--AYVGYDCTARSLHIGNYLTMMMLHWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKESIRGVFAKVLRYGDGKSDAVMLD 127
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BEII9 (Tyrosyl-tRNA synthetase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=tyrS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 325 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFS 552 L Y GFD TA SLH+G+L+ I++L W + G + + L+GG T RVGDPSGK R L ++ +E N GI++ FS Sbjct: 39 LIAYIGFDCTAPSLHVGSLVQIMMLRWLQKTGGKPIVLMGGGTTRVGDPSGKDESRKILTLEEIEANKQGIKQVFS 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_WOLTR (Tyrosyl-tRNA synthetase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tyrS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13 Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 250 LERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 ++ RG L T+ + L L N + Y GFD TA SLH+G+L+ I++L + G++ + L+GG+T ++GDPSGK R L I+ + +NI GI+K + G + +I+N Sbjct: 11 IQERGYLCQCTNIEGLDQLLLQNNYVV-AYIGFDCTASSLHVGSLIQIMMLRHLQKFGYKPIVLLGGSTTKIGDPSGKDKARSVLPIEDINQNISGIKKALKKMVYFNDGKAGAIIVN 127
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_RICBR (Tyrosyl-tRNA synthetase OS=Rickettsia bellii (strain RML369-C) GN=tyrS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 283 SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 +D R + + E + Y GFD TA SLH+G+L+ I++L + GH+ + +IGG T+++GDPSGK R + + + +N GI+K+ S G S+ ++L+ Sbjct: 17 TDLERLTSITKESKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHGHKPIVIIGGGTSKIGDPSGKDEARKTITKEDIARNAEGIKKSLSKFIKFGDGESDAIMLD 122
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCPU (Tyrosyl-tRNA synthetase OS=Mycoplasma pulmonis GN=tyrS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13 Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRK 543 +++ L++R + +ITS+ L + + +Y GFDPTA SLHLGN + ++ L F G + +A++GGAT+ +GDPS K ER L +T+ +N IRK Sbjct: 9 LIEELKKRKVFNNITSEEKVDLITLDHG---IYVGFDPTAISLHLGNYIQMVNLKRFQNVGFKTIAILGGATSMIGDPSFKDSERKLLSNETILENKKHIRK 107
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BLOPB (Tyrosyl-tRNA synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=tyrS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 220 HGRHPNVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIR 540 + ++ +++ L R L+ IT+ + K++ +YCGFDPT++SLH+G+L+ ++ L F GH+ + L+GG T +GDPS K ER I+T++K I I+ Sbjct: 2 NNKNIDIIQLLYERDLIAQITNQEAL-IKILKSKSITLYCGFDPTSDSLHIGHLVPLLCLRQFQIFGHRPIILLGGGTGLIGDPSFKDSERKLNLIETVQKWIEKIK 107 The following BLAST results are available for this feature:
BLAST of CX294898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294898 ID=CX294898; Name=CX294898; organism=Citrus clementina; type=EST; length=596bpback to top |