CX294898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MAGSA (Tyrosyl-tRNA synthetase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=tyrS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 334 YCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFS 552 Y GFD TA SLH+G L+ I++L W+ + GH+ + L+GG T R+GDP+GK R L + + N+ GI+ F+ Sbjct: 39 YIGFDCTATSLHVGGLMQIMLLRWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFT 111
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRCO (Tyrosyl-tRNA synthetase OS=Streptomyces coelicolor GN=tyrS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 43/122 (35.25%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 235 NVVDTLERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP---SGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNVVILN 588 ++VD L+ RGL +S D LR + T YCGFDPTA SLH+G+L+ ++ + + GH+ +AL+GGAT ++GDP + +++ PE +E+ + G + F + G + V++N Sbjct: 3 DIVDELKWRGLFAQSTDEDALRKALADGPVTF--YCGFDPTAPSLHVGHLVQVLTVRRLQQAGHRPLALVGGATGQIGDPRPTAERTLNSPETVAGWVER-LRGQIEPFLSFEGENAAVMVN 121
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_COREF (Tyrosyl-tRNA synthetase OS=Corynebacterium efficiens GN=tyrS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP 471 N++D L RGL+ T +L +L + ++ + +YCGFDPT SLH G+L+ +++L F + GH + L GGAT +GDP Sbjct: 4 NIIDELSWRGLINQST--DLDALREATQEPITLYCGFDPTGPSLHAGHLVPLLMLRRFQQAGHNPIVLAGGATGMIGDP 80
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_ANAMM (Tyrosyl-tRNA synthetase OS=Anaplasma marginale (strain St. Maries) GN=tyrS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 241 VDTLERRGLLESITSD----NLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNVVIL 585 ++TL+ RG L T D L +L + + Y GFD TA SLH+G+L+ I+V+ + + GH+ V L+GG T ++GDPSGK R L + N GI T + + V++ Sbjct: 8 LNTLQVRGYLHQCTDDVALDELMAL-----QPITAYIGFDCTARSLHIGSLMQIMVMRYLQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDGVVI 121
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRA5 (Tyrosyl-tRNA synthetase OS=Streptococcus agalactiae serotype V GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER 492 N+ D L+ RGL+ T ++ A E ++ Y G+DPTA+SLHLG+L+ I+ GH+ AL+GGAT +GDPS K +ER Sbjct: 2 NIFDELKERGLVFQTTDEDALRKALE-EGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDVER 86
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRA3 (Tyrosyl-tRNA synthetase OS=Streptococcus agalactiae serotype III GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER 492 N+ D L+ RGL+ T ++ A E ++ Y G+DPTA+SLHLG+L+ I+ GH+ AL+GGAT +GDPS K +ER Sbjct: 2 NIFDELKERGLVFQTTDEDALRKALE-EGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDVER 86
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCHJ (Tyrosyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLK------VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRK 543 +E++ L + + N+ SS EK +Y GFDPTA SLHLGN + I +L + G + +A+IGGAT +GDPS S ER LD TL N I+K Sbjct: 4 IEKQEFLTELKTRNILKDISSPEKFFNLKPDQGIYIGFDPTATSLHLGNYISISLLKRLQKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKK 107
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCH7 (Tyrosyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLK------VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRK 543 +E++ L + + N+ SS EK +Y GFDPTA SLHLGN + I +L + G + +A+IGGAT +GDPS S ER LD TL N I+K Sbjct: 4 IEKQEFLAELKTRNILKDISSPEKFFNLKPDQGIYIGFDPTATSLHLGNYISISLLKRLQKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKK 107
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCH2 (Tyrosyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain 232) GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLK------VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRK 543 +E++ L + + N+ SS EK +Y GFDPTA SLHLGN + I +L + G + +A+IGGAT +GDPS S ER LD TL N I+K Sbjct: 4 IEKQEFLTELKTRNILKDISSPEKFFNLKPDQGIYIGFDPTATSLHLGNYISISLLKRLQKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKK 107
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_AMOA5 (Tyrosyl-tRNA synthetase OS=Amoebophilus asiaticus (strain 5a2) GN=tyrS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 241 VDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN---ILGIRKTFSTIFGSSNVVIL 585 + L RG++ IT L ++ + Y GFDPTA SLH+GNL I++L F GH+ +A++GGAT +GDPS KS ER L + L N I+ K F S+N L Sbjct: 5 IANLRWRGMIHDITPGLEAQL---QKEMITGYIGFDPTAPSLHVGNLATIMLLKHFQLAGHKPIAVVGGATGMIGDPSFKSTERKFLSEEELLHNQSCIMKQLKCFLDFSSSANTAEL 119 The following BLAST results are available for this feature:
BLAST of CX294898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294898 ID=CX294898; Name=CX294898; organism=Citrus clementina; type=EST; length=596bpback to top |