CX294898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_ANAD2 (Tyrosyl-tRNA synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=tyrS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIR 540 N+++ L R L+ T LA + Y GFDPTA+SLH+G+LL ++ L+W RCG + ++GG T VGDPSGK ERP L ++ +++N+ IR Sbjct: 3 NLLEALVSRSLVHDQTPGLQARLAQG---PITGYVGFDPTADSLHVGHLLAVMSLAWLQRCGGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIR 101
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_SYNAS (Tyrosyl-tRNA synthetase OS=Syntrophus aciditrophicus (strain SB) GN=tyrS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFS 552 NV D RG +E +T +N ++ + E L Y GFDPTA SLH+G+L+ I+ L R GH ++AL+GG TA +GDPSGK+ R L + +E N +R+ F+ Sbjct: 5 NVYDVFMERGFIEQVTDEN--AVRKALEAPLACYIGFDPTARSLHIGSLVPIMALIHLQRHGHTSIALVGGGTALIGDPSGKTEMRQILTREKIELNATCMRRQFA 108
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_RHOS4 (Tyrosyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=tyrS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 48/127 (37.80%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 229 HP--NVVDTLERRGLLESITSDNLRSLASSNEK-TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 HP + + ++ RG L T ++++L + K + Y G+D TA SLH+G+LL I++L W + GH+ + L+GG T +VGDPS +S ERP L D +++NI G+RK F+ G+++ ++LN Sbjct: 4 HPKSDFLRVMQERGYLADCT--DMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQKTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDALMLN 128
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_LISIN (Tyrosyl-tRNA synthetase OS=Listeria innocua GN=tyrS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF 561 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ +R IF Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIF 109
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_ANADE (Tyrosyl-tRNA synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tyrS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIR 540 N+++ L R L+ T LA + Y GFDPTA+SLH+G+LL ++ L+W RCG + ++GG T VGDPSGK ERP L ++ +++N+ IR Sbjct: 3 NLLEALVPRSLVHDQTPGLQARLAQG---PITGYVGFDPTADSLHVGHLLAVMSLAWLQRCGGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIR 101
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY2_BACC1 (Tyrosyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 10987) GN=tyrS2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF---GSSNVVILN 588 N++D LE RG + T + LR L EK + +YCG DPT +S+H+G+L+ +++ F GH V LIGGAT +GDPSG+ ER ++ ++ N+ + +F G+S V ++N Sbjct: 2 NIIDELEWRGAINQQTDEEGLRKLVE--EKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVN 121
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_BACHK (Tyrosyl-tRNA synthetase 1 OS=Bacillus thuringiensis subsp. konkukian GN=tyrS1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 238 VVDTLERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNV 576 ++ LE RGL+ T ++ L L ++++K+YCGFDPTA+SLH+G++L +++L F GHQ +AL+GG T +GDPSGK ER DT+ I+ S NV Sbjct: 3 ILQDLEFRGLINQQTDAEGLEQLLE--KESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENV 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_BACCZ (Tyrosyl-tRNA synthetase 1 OS=Bacillus cereus (strain ZK / E33L) GN=tyrS1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 238 VVDTLERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNV 576 ++ LE RGL+ T ++ L L ++++K+YCGFDPTA+SLH+G++L +++L F GHQ +AL+GG T +GDPSGK ER DT+ I+ S NV Sbjct: 3 ILQDLEFRGLINQQTDAEGLEQLLE--KESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENV 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_BACC1 (Tyrosyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 10987) GN=tyrS1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 238 VVDTLERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNV 576 ++ LE RGL+ T ++ L L ++++K+YCGFDPTA+SLH+G++L +++L F GHQ +AL+GG T +GDPSGK ER DT+ I+ S NV Sbjct: 3 ILQDLEFRGLINQQTDAEGLEQLLE--KESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENV 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_BACAN (Tyrosyl-tRNA synthetase 1 OS=Bacillus anthracis GN=tyrS1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 238 VVDTLERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSNV 576 ++ LE RGL+ T ++ L L ++++K+YCGFDPTA+SLH+G++L +++L F GHQ +AL+GG T +GDPSGK ER DT+ I+ S NV Sbjct: 3 ILQDLEFRGLINQQTDAEGLEQLLE--KESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENV 114 The following BLAST results are available for this feature:
BLAST of CX294898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294898 ID=CX294898; Name=CX294898; organism=Citrus clementina; type=EST; length=596bpback to top |