CX294898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_EHRCR (Tyrosyl-tRNA synthetase OS=Ehrlichia chaffeensis (strain Arkansas) GN=tyrS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 313 NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGI 537 +++ + Y GFD TA+SLH+G+L+ +++L + GH+ + L+G T ++GDPSGK R L +E+N LGI Sbjct: 31 SQQCVHAYIGFDCTAKSLHVGSLIQVMILRHLQKFGHKPIILLGDGTTKIGDPSGKDKSRAMLSASEIEENALGI 105
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_STRT2 (Tyrosyl-tRNA synthetase 1 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tyrS1 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 + + L+ RGL+ T+D + + E + Y G+DPTA+SLHLG+L+ I+ GH+ AL+GGAT +GDPS K ER +T+E + I+ S G + V++N Sbjct: 3 IFEELKARGLIFQ-TTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY1_STRT1 (Tyrosyl-tRNA synthetase 1 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tyrS1 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 + + L+ RGL+ T+D + + E + Y G+DPTA+SLHLG+L+ I+ GH+ AL+GGAT +GDPS K ER +T+E + I+ S G + V++N Sbjct: 3 IFEELKARGLIFQ-TTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_NOCFA (Tyrosyl-tRNA synthetase OS=Nocardia farcinica GN=tyrS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 235 NVVDTLERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP 471 +++D L RGL+ T D LR+ ++ TL Y GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP Sbjct: 4 DIIDELTWRGLIAQSTDLDALRAALAAGPLTL--YAGFDPTAASLHAGHLVPLLALKRFQRAGHRPIVLAGGATGLIGDP 81
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_CHLPN (Tyrosyl-tRNA synthetase OS=Chlamydia pneumoniae GN=tyrS PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 241 VDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN 525 + +L+ R +LE+ T+ S E + Y GFDPTA +LH+G+ +GI L G +AL+GGAT VGDPSGK ER L + N Sbjct: 5 LQSLQERNILENFTAG-----LESVEGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDN 94
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORGA (Tyrosyl-tRNA synthetase OS=Borrelia garinii GN=tyrS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 241 VDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTI--FGSS 570 ++ L +RG L+ TS + S EK + Y G D T+ SLH+G+L+ + + + GH + LIG +T ++GDPSGKS R L + + N L I+ I F SS Sbjct: 5 LNLLYKRGFLKQCTSLKVLSDLMDREKIV-FYAGVDTTSSSLHIGHLIPFLAMMHLRQHGHMPIVLIGDSTTKIGDPSGKSEMRKILSSEVINNNALSIKNQLQKITRFSSS 115
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_ACIAD (Tyrosyl-tRNA synthetase OS=Acinetobacter sp. (strain ADP1) GN=tyrS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN 525 L +RG E I+ ++L N + L++ GFDPTA LHLG+ + I L F GH+ LIG TA +GDP+GKS RP L + +E N Sbjct: 13 LIQRGTHEIISEEDLLKKLKEN-RPLRIKAGFDPTAPDLHLGHTVLINKLKAFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLTREQVEAN 103
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRGG (Tyrosyl-tRNA synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=tyrS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 235 NVVDTLERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILGIRKTFSTIFGSSNVVILN 588 ++VD L+ RGL +S D LR + T YCGFDPTA SLH+G+L+ ++ + + G + +AL+GGAT ++GDP + ER D +T+ + + G + F T G + ++N Sbjct: 3 DIVDELKWRGLFAQSTDEDALRKALADGPVTF--YCGFDPTAASLHVGHLVQVLTMRRLQQAGLKPLALVGGATGQIGDPR-PTAERTLNDPETIAAWVQRLRGQIEPFLTFEGPNAATMVN 121
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRAW (Tyrosyl-tRNA synthetase OS=Streptomyces avermitilis GN=tyrS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 235 NVVDTLERRGLLE-SITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKS 483 ++VD L+ RGL+ S D LR + T YCGFDPTA SLHLGNL+ I+ + + G++ + L+GGAT +GDP S Sbjct: 3 DIVDELKWRGLVALSTDEDALRKAFADGPVTF--YCGFDPTAPSLHLGNLVQILTMRRIQQAGNRPLGLVGGATGLIGDPKPNS 84
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCS5 (Tyrosyl-tRNA synthetase OS=Mycoplasma synoviae (strain 53) GN=tyrS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN 525 V+ L R +L+ I+++ S K VY GFDPTA+SLHLGN + I+ L F + A+A++GGAT +GDPS +S ER L + L KN Sbjct: 4 VLTELRDREILKDISNEEK---FLSLPKNSGVYVGFDPTADSLHLGNYVQIVNLIRFKKHNWNALAVLGGATGMIGDPSFRSTERVLLSTEELLKN 96 The following BLAST results are available for this feature:
BLAST of CX294898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294898 ID=CX294898; Name=CX294898; organism=Citrus clementina; type=EST; length=596bpback to top |