CX294898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCTU (Tyrosyl-tRNA synthetase OS=Mycobacterium tuberculosis GN=tyrS PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEK-TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP 471 ++D L RGL+ T +L +LA+ ++ + VY GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP Sbjct: 5 ILDELSWRGLIAQST--DLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDP 81
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_MYCBO (Tyrosyl-tRNA synthetase OS=Mycobacterium bovis GN=tyrS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEK-TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP 471 ++D L RGL+ T +L +LA+ ++ + VY GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP Sbjct: 5 ILDELSWRGLIAQST--DLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDP 81
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_DESPS (Tyrosyl-tRNA synthetase OS=Desulfotalea psychrophila GN=tyrS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 232 PNVVDTLE--RRGLLESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN 525 P++ + +E RG ++ I+ D L + +T LKV GFDPTA LHLG+ + + L F GHQ + LIG T +GDP+GKS R L ++ + +N Sbjct: 4 PSLEEQIELIERGCVDCISRDELVKKLKKSAETGIPLKVKAGFDPTAPDLHLGHTVLLQKLKQFQDLGHQVIFLIGDFTGMIGDPTGKSETRKALTVEQVAEN 106
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORBZ (Tyrosyl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTI 558 L +RG L+ TS + S EK + Y G D T+ SLH+G+L+ + + + GH + LIG +TA++GDPSGKS R L + + N L I+ I Sbjct: 8 LHKRGFLKQCTSLKVLSDLMDREKIV-FYAGVDATSSSLHIGHLIPFLAMMHLRQHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRI 109
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORBU (Tyrosyl-tRNA synthetase OS=Borrelia burgdorferi GN=tyrS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTI 558 L +RG L+ TS + S EK + Y G D T+ SLH+G+L+ + + + GH + LIG +TA++GDPSGKS R L + + N L I+ I Sbjct: 8 LHKRGFLKQCTSLKVLSDLMDREKIV-FYAGVDATSSSLHIGHLIPFLAMMHLRQHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRI 109
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORAP (Tyrosyl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 241 VDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTI 558 ++ L +RG L+ TS + S EK + Y G D T+ SLH+G+L+ + + + GH + LIG +T ++GDPSGKS R L ++ + N I+ I Sbjct: 5 LNLLHKRGFLKQCTSLKVLSDLMDREKIV-FYAGVDATSSSLHIGHLIPFLAMMHLRQHGHIPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRI 109
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_STRTD (Tyrosyl-tRNA synthetase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 238 VVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILN 588 + + L+ RGL+ T+D + + E + Y G+DPTA+SLHLG+L+ I+ GH+ AL+GGAT +GDPS ER +T+E + I+ S G + V++N Sbjct: 3 IFEELKARGLIFQ-TTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFNDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORRA (Tyrosyl-tRNA synthetase OS=Borrelia recurrentis (strain A1) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN 573 L++RG L+ T+ S EK + Y G D T+ SLH+G+L+ +V+ R GH + LIGG T ++GDPSGK R L + +++N+ I I SN Sbjct: 8 LDKRGFLKQCTNLEELSTLMDREKIV-FYVGVDATSASLHIGHLIPFMVMLHLQRQGHIPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSN 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_BORDL (Tyrosyl-tRNA synthetase OS=Borrelia duttonii (strain Ly) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFGSSN 573 L++RG L+ T+ S EK + Y G D T+ SLH+G+L+ +V+ R GH + LIGG T ++GDPSGK R L + +++N+ I I SN Sbjct: 8 LDKRGFLKQCTNLEELSTLMDREKIV-FYVGVDATSASLHIGHLIPFMVMLHLQRQGHIPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSN 114
BLAST of CX294898 vs. ExPASy Swiss-Prot
Match: SYY_ACHLI (Tyrosyl-tRNA synthetase OS=Acholeplasma laidlawii (strain PG-8A) GN=tyrS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 250 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIFG--SSNVVILN 588 LE RG+++ + SD + NE+ +K Y G+DPT ESL +G+L+ I+ + + + GH V LIGG T +GDP E E + TLEK++ +K + I G NV +N Sbjct: 7 LEYRGMVKDV-SDLELAKQLLNEQKIKFYVGYDPTGESLTVGHLVQIVRMLYLQKHGHTPVVLIGGGTGLIGDPR----ETSERSLLTLEKSLENAQKIENQIKGLIKGNVEFVN 116 The following BLAST results are available for this feature:
BLAST of CX294898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294898 ID=CX294898; Name=CX294898; organism=Citrus clementina; type=EST; length=596bpback to top |