CX294904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y2608_ARATH (B3 domain-containing protein At2g36080 OS=Arabidopsis thaliana GN=ARF31 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.491e-36 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 295 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN---EKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 EKE +F+K +TPSDVGKLNRLVIPKQHAE+YFPL +++ EKGLLL FED GKPWRFRYSYWNSSQSYV+TKGWSR+VK+K LDAGDVV F Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLF 126
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.865e-36 Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 253 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE--KGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 G + D+VL + +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL S S KG+L+NFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV+F Sbjct: 171 GSSTTQNDKVLKT--REVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y3158_ARATH (B3 domain-containing protein At3g11580 OS=Arabidopsis thaliana GN=ARF32 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35 Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 295 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN-----------EKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 ++E +F+K +TPSDVGKLNRLVIPKQHAEKYFPL++++N EKG+LL+FED +GK W+FRYSYWNSSQSYV+TKGWSR+VKDK LDAGDVV F Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFF 125
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 301 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS-NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 E +F+K VTPSDVGKLNRLVIPK HAEK+FPL SS+ + KG+LLNFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVVSF Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSF 274
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.229e-35 Identity = 71/93 (76.34%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 298 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS---NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 ++H+FDK VTPSDVGKLNRLVIPKQHAEK+FPL S KG+LLNFED GK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV F Sbjct: 212 RDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGF 304
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y8577_ORYSJ (Putative B3 domain-containing protein Os08g0157700 OS=Oryza sativa subsp. japonica GN=Os08g0157700 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.203e-34 Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 280 VLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 V+++ E+EHMFDKVVTPSDVGKLNRLV+PKQHAE++FP ++ G L FEDR G PWRFRYSYW SSQSYVMTKGWSRFV+ +L AGD VSF Sbjct: 61 VVVAAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAA----GTQLCFEDRAGTPWRFRYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSF 152
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.223e-33 Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 301 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE---KGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 E +F+K VTPSDVGKLNRLVIPK AEK+FPL +N KG+LLNFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K+L AGD++SF Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISF 271
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.724e-33 Identity = 69/98 (70.41%), Postives = 78/98 (79.59%), Query Frame = 1 Query: 298 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS--------SNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL + S KG+L+N EDR GK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV F Sbjct: 191 REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.069e-33 Identity = 70/111 (63.06%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 289 SLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD------------------SSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 S +EH+FDK VTPSDVGKLNRLVIPKQHAEK+FPL + KG+LLNFED GK W+FRYSYWNSSQSYV+TKGWSRFVK+K L AGD V F Sbjct: 186 SAAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGF 296
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 253 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL------DSSS---NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 G G + S +E +F+K VTPSDVGKLNRLV+PKQHAEK+FPL DS+S KG+LLNFED GK WRFRYSYWNSSQSYV+TKGWSRFV++K L AGD + F Sbjct: 163 GRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVF 276 The following BLAST results are available for this feature:
BLAST of CX294904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294904 ID=CX294904; Name=CX294904; organism=Citrus clementina; type=EST; length=609bpback to top |