CX294904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y2641_ORYSJ (B3 domain-containing protein Os02g0764100 OS=Oryza sativa subsp. japonica GN=Os02g0764100 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.306e-32 Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 289 SLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD-SSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFIG 573 S +E +F+K VTPSDVGKLNRL++PKQHAEK+FPL +SS+ G+LLNFED GK WRFRYS WNSSQSYV+TKGWSRFV++K L AGD + F G Sbjct: 10 SWAREPLFEKAVTPSDVGKLNRLLVPKQHAEKHFPLRRTSSDASGVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSG 105
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.330e-31 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 298 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL-----DSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFIGVLVIW 588 +E +F+K VTPSDVGKLNRLV+PKQ AE++FP S + KG+LLNFED +GK WRFRYSYWNSSQSYV+TKGWSRFV++K L GD V+F W Sbjct: 174 REPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAW 275
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y6078_ORYSJ (B3 domain-containing protein Os06g0107800 OS=Oryza sativa subsp. japonica GN=Os06g0107800 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 6.281e-30 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 298 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEK--GLLLNFEDRNG--KPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +E+MF+KVVTPSDVGKLNRLV+PK +AEKYFPL ++ G +L FED G WRFRYSYW+SSQSYV+TKGWSR+V+DK+L AGD VSF Sbjct: 33 REYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSF 126
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAVL2_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana GN=At1g50680 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.832e-21 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 241 KDIIGEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DSSSNEKGLLLN--------FEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 K GE E D+ + +F K +TPSDVGKLNRLVIPK++A KY P D S E+G ++ F DR + W+FRY YW SSQS+V T+GW+ FVK+K L DV++F Sbjct: 137 KQARGEVNQESDKCFSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAF 253
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: RAVL3_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana GN=At1g51120 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 238 TKDIIGEGEA-EEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL--------DSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +K ++G GE +E S + +F K +TPSDVGKLNRLVIPK++A KY P ++S + + + F DR + W+FRY YW SSQS+V T+GW+ FVK+K L D++ F Sbjct: 155 SKQVLGGGEGGQESNKCFSCTQ--LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVF 271
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12 Identity = 36/89 (40.45%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 307 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +F+K+++ SD G++ RLV+PK+ AE YFP + S +GL L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F Sbjct: 452 LFEKMLSASDAGRIGRLVLPKKCAEAYFP--AISQAEGLPLKVQDATGKEWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTF 537
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11 Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 307 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +F+KV++ SD G++ RLV+PK AE YFP S +G L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F Sbjct: 362 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVL-EGVTPCIQSLQLQAGDTVTF 447
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 307 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +F+KV++ SD G++ RLV+PK AE YFP S +GL L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTF 370
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 307 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSF 567 +F+K ++ SD G++ RLV+PK AE YFP S S +G+ L +D G+ W F++ YW N+S+ YV+ +G + ++ L AGD V+F Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQS--EGIPLKIQDVRGREWTFQFRYWPNNNSRMYVL-EGVTPCIQSMMLQAGDTVTF 379
BLAST of CX294904 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 40/106 (37.74%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 256 EGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFI 570 +G E+ VL HMF K +T SD +P++ AE FP LD S L D +G WRFR+ Y + +++T GWS FV KKL +GD V F+ Sbjct: 141 DGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL 246 The following BLAST results are available for this feature:
BLAST of CX294904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294904 ID=CX294904; Name=CX294904; organism=Citrus clementina; type=EST; length=609bpback to top |