CX294907

Overview
NameCX294907
Unique NameCX294907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31
Identity = 74/183 (40.44%), Postives = 117/183 (63.93%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++AK DP +   I EE+GEH+V+G GELHLE+    ++D    G EI  S+P+V +RETV + S + V  KSPNKHNR Y+   PLE+ L +A+ +G++         S     E+G DK+ A+K+W    +    ++ ++  +G+QYL+E+K+ ++ GF+ A  +G LA+E
Sbjct:  403 KDLPKLIEVLRQVAKEDPTIKVEINEETGEHLVSGMGELHLEVISYRIKDK---GVEIQTSEPIVVYRETVSQLSPQ-VEGKSPNKHNRFYITVEPLEDELFKALQEGKLKEGKVKGKESANDFMEYGLDKEEARKVW----DVYNRSVFINATRGIQYLDEVKELLIEGFESALNDGPLAKE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30
Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 2
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +L +LVE LK L   DP +   I+ E+G+ +++G G LHLEI    L++      E   S P++ FRETV E+S +    KSPNKHNRLY    PL+E   E I    I    +P+ R+KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+W+ + G LA+E
Sbjct:  409 ELARLVEALKDLVVEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKERTK--TEFTVSPPLIRFRETVRERS-QVWEGKSPNKHNRLYFYVEPLDETTIELIASREITEDQEPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTSGIQYLREIRDYIVQGFRWSMEAGPLAQE 585          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30
Identity = 76/186 (40.86%), Postives = 116/186 (62.37%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILS---EEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++ K DP +   I EE+GEH++AG GELHLE+ +  + D    G E+  S+P+V +RET+   +   V  KSPNKHNR Y++  PL + L  AI +G I    + + + K L+   +E G DKD AKK+W    +    ++ V+  +G+QYL+EIK+ ++ GF+ A  +G LA E
Sbjct:  403 KDLPKLIEVLRQVGKEDPTLRVEINEETGEHLIAGMGELHLEVIIYRINDK---GLEVETSEPIVVYRETIAG-TATNVEGKSPNKHNRFYIDIEPLSDDLMNAISEGEI---PEGRVKGKELAKTFQEHGLDKDEAKKVW----DVYKHSIFVNKTRGIQYLDEIKELLMEGFESALDDGPLANE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 1.682e-30
Identity = 73/183 (39.89%), Postives = 115/183 (62.84%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DL K+++ L++L+  DP ++  I EE+GE++++G G LHLE+ L+ L++++  G +++ S P+V +RE++  KS +    KSPNKHN+LY+   PL E   E I +G I    D K  ++IL E+  WD D AKKI          N+ V+   GVQ+L E+ D+++ GF+ A KEG LA E
Sbjct:  408 KDLNKMIDALRKLSIEDPNLLVKINEETGEYLLSGMGFLHLEVSLQLLKENY--GVDVVTSPPIVVYRESIRTKS-QVFEGKSPNKHNKLYISVEPLNEQTIELIANGTIKEDMDSKEMARILKEQADWDYDEAKKIVAIDENI---NVFVNATSGVQHLREVMDTILQGFRLAMKEGPLAHE 584          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ ++    ++  S P+V +RE+V +KS   V  KSPNKHNR Y+   P+ + + EAI +G I  G   +PK  +K L+E  G D +LAK I     +    NM  D  KG+QYLNE+ D +V GF  A  EG LA+E
Sbjct:  401 KDLPKLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYRLKTEWKLDVDV--SPPIVVYRESVTKKS-PIVEGKSPNKHNRFYITVEPMPDEIYEAIREGIIPEGRPKNPKEVAKKLAE-LGMDYELAKGI----VDVYNGNMFFDNTKGIQYLNEVMDLLVDGFHMAMDEGPLAKE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 74/186 (39.78%), Postives = 118/186 (63.44%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEF---GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++ K DP V   I EE+GEH+++G GELHLEI    + +    G EI  S+P+V +RETV   +   V  KSPNKHNR Y+E  P+E  + +AI +G+I    + + + K +++ F   G DK+ A+++W    +    N+ ++M +G+QYL+EIK+ ++ GF+ A   G +A+E
Sbjct:  403 KDLPKLIEVLRQVGKEDPTVRVEINEETGEHLISGMGELHLEIIAYRINEK---GVEIETSEPIVVYRETVAG-TAGPVEGKSPNKHNRFYIEIEPVEASVMQAIQEGKI---KEGRVKGKEMAKNFIEAGMDKEEARRVW----DVYEKNLFINMTRGIQYLDEIKELLMDGFESAMDNGPVAKE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 71/183 (38.80%), Postives = 115/183 (62.84%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DL K+++ L++L+  DP +V  I EE+GE++++G G LH+E+ L+ L+D++  G +++ + P+V +RE+V  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL ++  WD D AKKI          N+++D   GVQ+L EI D+++ G++ A +EG LA E
Sbjct:  407 KDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHVEVSLQLLKDNY--GVDVVTTPPIVVYRESVRNKS-QVFEGKSPNKHNKFYISVEPLNDKTIELISNGTIKEDMDSKEMAKILRDQADWDYDEAKKIIAIDENV---NVLIDATSGVQHLREIMDTMLQGYRLAMREGPLAHE 583          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKLVE L+++AK DP +   I EE+GEH+++G GELHLEI    ++ D   G EI+ S+P+V +RETV  K    V  KSPN+HNR Y    PL E +   I  G I        R  +L +  G DKD AK +        G NM++DM KG+QYLNE  + ++ G   A   G LA+E
Sbjct:  403 KDLPKLVEVLRQVAKEDPTLGIAINEETGEHLISGMGELHLEIVTGRIKRD--KGVEIVTSEPIVVYRETVTGK-VEDVEGKSPNRHNRFYFTLEPLPEEIVNLIKAGEITMNQQAIERRDVLLKA-GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.346e-30
Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ D+  G +I  S+P+V +RE++  KS   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+E  G D ++A+ I     +    NM +D  KGVQYLNE+ D ++ GF  A  EG LA E
Sbjct:  401 KDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLKKDW--GIDIEVSEPIVVYRESIT-KSSPMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRVKNPKEVAKKLAE-LGMDYEIARGI----VDIYNGNMFIDNTKGVQYLNEVMDLLIDGFHQAMDEGPLARE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.346e-30
Identity = 80/183 (43.72%), Postives = 111/183 (60.66%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKLVE L+++AK DP V  +I EE+GEH+++G GELHLEI    ++ D   G +I+ S P+V +RET+   S   V  KSPN+HNR Y+E  P++  + + I DG I        R   L    G DKD AK +     E T  NM +DM KG+QYLNE  + V+ G++ A + G LA+E
Sbjct:  403 KDLPKLVEVLRQIAKEDPTVQVSINEETGEHLISGMGELHLEIITGRIKRD--KGVDILTSPPIVVYRETITG-SVGPVEGKSPNRHNRFYIELEPMDPAIVKMILDGEISMNQQAIERRDALVAA-GMDKDEAKNVKAI--EAT--NMFIDMTKGIQYLNETMELVLDGWREALRGGPLADE 577          
The following BLAST results are available for this feature:
BLAST of CX294907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_METS34.426e-3140.44Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_PYRAE1.288e-3042.31Elongation factor 2 OS=Pyrobaculum aerophilum GN=f... [more]
EF2_METST1.288e-3040.86Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_SULTO1.682e-3039.89Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_THEGJ2.869e-3044.32Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_METTH2.869e-3039.78Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_METS52.869e-3038.80Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METB62.869e-3043.17Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_PYRHO8.346e-3042.70Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_METMJ8.346e-3043.72Elongation factor 2 OS=Methanoculleus marisnigri (... [more]

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Properties
Property NameValue
Genbank descriptionC05057D02SK PhIFruit1 Citrus clementina cDNA clone C05057D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294907 ID=CX294907; Name=CX294907; organism=Citrus clementina; type=EST; length=621bp
CTCGTGCCGAATTCGGCACGAGGATCTCCCTAAGCTTGTTGAAGGTCTTA
AGCGTTTGGCCAAGTCAGATCCTATGGTTGTCTGTACAATTGAGGAGTCT
GGCGAGCACATTGTTGCTGGTGCGGGAGAACTTCACCTTGAGATCTGTTT
GAAGGATCTGCAGGACGATTTCATGGGAGGTGCTGAAATTATTAAATCTG
ATCCTGTTGTGTCCTTCCGTGAAACTGTCCTTGAGAAGTCTTGCCGCACT
GTGATGAGTAAGTCTCCCAACAAGCATAATCGTCTCTACATGGAAGCCCG
ACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCCGCATTGGTC
CAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAGGAGTTCGGC
TGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCCTGAGACCAC
TGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAATACTTGAATG
AAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCGAAAGAAGGT
GCGCTGGCTGAAGAGACATGAGAGGTATCTGCTTTGAGTATGTGATGTTG
TTCTTACGCTGATGCCATTCA
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