CX294907

Overview
NameCX294907
Unique NameCX294907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig594 contig Ccv1_Contig594:1..621. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27
Identity = 74/184 (40.22%), Postives = 107/184 (58.15%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKLVE L+++AK DP +  T+ EE+GEH++AG GELHLE+    +Q D     EI  S P+V +RET+ +K    V  KSPN+HNR Y+   PL+  + E I  G I     + + R K++  E G  K+ AK I          N+ +D+ KG+QYLNE  + ++ GF+   + G L  E
Sbjct:  402 KDLPKLVEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIQRD--KNVEITTSKPIVVYRETI-KKKIEPVEGKSPNRHNRFYIYVEPLDTAIVEMIKSGDISMNLPELERRQKLI--ELGMGKEEAKGI----VGIHNSNIFIDITKGIQYLNETMELILDGFEEVMRAGPLTRE 576          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.877e-27
Identity = 76/184 (41.30%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKLVE L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +  I  R  + + R K+++   G +KD AKKI          N   DM KG+QYLNE  + ++ GF    K G L++E
Sbjct:  402 KDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEITTTPPLVVYRETITG-TAGPVEGKSPNRHNRFYVIVEPLEPEVRELIRNDEISMRMPEVERREKLMAA--GLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKE 576          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.613e-27
Identity = 72/184 (39.13%), Postives = 108/184 (58.70%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RET+ +K    V  KSPN+HNR Y+   PL+  +  AI  G I     + + R K++  + G +K+ AK I          N+ +DM KG+QYLNE  + ++ GF+   + G L  E
Sbjct:  402 KDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRETI-KKKIEPVEGKSPNRHNRFYIYVEPLDLEIVSAIKSGEIHMNLPELERRQKLI--DLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELILDGFEEVMRAGPLTRE 576          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.282e-26
Identity = 70/186 (37.63%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++A+ D  V   I EE+GEH+++G GELH+E+ + + +    GG E+   +P+V +RET++  S   +  KSPNKHN+LYM A P+EE +  A  +G++   D  K   A  +    E G +KD AKK+          NM+V+M +G+  L+E ++ ++ GF+   + G LA E
Sbjct:  404 KDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAE 583          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.282e-26
Identity = 71/186 (38.17%), Postives = 111/186 (59.68%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++A+ D  V   I EE+GEH+++G GELH+E+ + + +    GG E+   +P+V +RET+   S   +  KSPNKHN+LYM A P++E +  A  +G+I   D  K   A  +    E G DKD AKK+          NM+V+M +G+  L+E ++ ++ GF+   + G LA E
Sbjct:  404 KDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLDKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAE 583          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.282e-26
Identity = 70/186 (37.63%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++A+ D  V   I EE+GEH+++G GELH+E+ + + +    GG E+   +P+V +RET++  S   +  KSPNKHN+LYM A P+EE +  A  +G++   D  K   A  +    E G +KD AKK+          NM+V+M +G+  L+E ++ ++ GF+   + G LA E
Sbjct:  404 KDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAE 583          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.287e-26
Identity = 67/184 (36.41%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   23 DLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSE--EFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLP+L++ L+ ++K+DP +   I +E+GEH+++G GELHL++ L  +++D+    E+  S+P+V +RETV EK       KSPNKHNR Y E  PL+  + +AI+DG I      K +  I+      G D++ A+ + C      G N++ D+ +G+QYL+E  + ++  F      G LA E
Sbjct:  402 DLPRLIDVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--IEVETSEPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKTIIETLVSKGIDREEARGLVC----VEGTNIMFDVTRGIQYLDETMELLIEAFTEVMNRGPLANE 578          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.287e-26
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETT-GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++AK DP +   I E++GEH+++G GELHLE+  + ++ +   G  +   +P+V FRE   ++S R V  +SPN HNR Y+   PLE+ + E I  G +   D P+   +    E G DKD A+ +     ET    N+ +D  KG+Q+LNE  + VV G + A  +G LA E
Sbjct:  403 DDLPKLIETLQQVAKEDPTIQIEINEDTGEHLISGQGELHLEVITQRIERN--QGIPVNTGEPIVVFREAPQQES-REVEGRSPNNHNRFYITVEPLEDDIVETIKMGDVS-MDMPELERREELMEQGMDKDTAQNV-----ETIHNTNVFIDDTKGIQHLNETMELVVEGLEEALNDGPLAAE 577          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.312e-26
Identity = 70/183 (38.25%), Postives = 106/183 (57.92%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++AK DP +   I E++GEH+++G GELHLE+  + ++ +   G  I   +P+V +RE   E S R V  +SPN HNR Y+   PL E + E I  G     D P+   +   +E G DKD ++ I        G N+++D  KG+Q+LNE  + V+ G + A  +G LA E
Sbjct:  402 DDLPKLIETLQQVAKEDPTIQVEINEDTGEHLISGQGELHLEVIGQRIERN--QGIPINTGEPIVVYREAPQEDS-REVEGRSPNNHNRFYISIEPLGEDIVETIKMGEAS-MDMPELERREALQEAGMDKDDSQNI----EHIHGTNILLDETKGIQHLNETMELVIEGLEEALDDGPLASE 576          
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 69/188 (36.70%), Postives = 113/188 (60.11%), Query Frame = 2
Query:   20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK-----ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            +DLPKL+E L+++ + D  V   I EE+GEH+++G GELH+E+ + + +    GG E+   +P++ +RET+   S   +  KSPNKHN+LYM A P+EE +  A  +G+I   D  K     A ++++  E G +++ AKK+          NM+V+M KG+  L+E ++ ++ GF+   K G LA E
Sbjct:  404 KDLPKLIEILRQIGREDNTVRIEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIIVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKIHDEDFKKKTNVDAETRLI--EAGLEREQAKKVM----SIYNGNMIVNMTKGIVQLDEARELIIEGFKEGVKGGPLASE 583          
The following BLAST results are available for this feature:
BLAST of CX294907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_METTE2.273e-2740.22Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_METBU3.877e-2741.30Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METBF6.613e-2739.13Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_METMP3.282e-2637.63Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METM73.282e-2638.17Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METM53.282e-2637.63Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_THEVO4.287e-2636.41Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_NATPD4.287e-2638.59Elongation factor 2 OS=Natronomonas pharaonis (str... [more]
EF2_HALMA7.312e-2638.25Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_METVS2.778e-2536.70Elongation factor 2 OS=Methanococcus vannielii (st... [more]

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Properties
Property NameValue
Genbank descriptionC05057D02SK PhIFruit1 Citrus clementina cDNA clone C05057D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294907 ID=CX294907; Name=CX294907; organism=Citrus clementina; type=EST; length=621bp
CTCGTGCCGAATTCGGCACGAGGATCTCCCTAAGCTTGTTGAAGGTCTTA
AGCGTTTGGCCAAGTCAGATCCTATGGTTGTCTGTACAATTGAGGAGTCT
GGCGAGCACATTGTTGCTGGTGCGGGAGAACTTCACCTTGAGATCTGTTT
GAAGGATCTGCAGGACGATTTCATGGGAGGTGCTGAAATTATTAAATCTG
ATCCTGTTGTGTCCTTCCGTGAAACTGTCCTTGAGAAGTCTTGCCGCACT
GTGATGAGTAAGTCTCCCAACAAGCATAATCGTCTCTACATGGAAGCCCG
ACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCCGCATTGGTC
CAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAGGAGTTCGGC
TGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCCTGAGACCAC
TGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAATACTTGAATG
AAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCGAAAGAAGGT
GCGCTGGCTGAAGAGACATGAGAGGTATCTGCTTTGAGTATGTGATGTTG
TTCTTACGCTGATGCCATTCA
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