CX294907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25 Identity = 68/186 (36.56%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 +DLPKL+E L+++A+ D V I EE+GEH+++G GELH+E+ + + + GG E+ +P+V +RET+ S + KSPNKHN+LYM A P++E + A +G+I D K A + E G +K+ AK++ NM+V+M +G+ L+E ++ ++ GF+ + G LA E Sbjct: 404 KDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLEKEQAKRVM----SIYNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAE 583
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23 Identity = 62/183 (33.88%), Postives = 106/183 (57.92%), Query Frame = 2 Query: 20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 +DLPKL+E L++++K DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D KG+Q+LNE + VV G + ++G LA E Sbjct: 402 DDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAE 576
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23 Identity = 62/183 (33.88%), Postives = 106/183 (57.92%), Query Frame = 2 Query: 20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 +DLPKL+E L++++K DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D KG+Q+LNE + VV G + ++G LA E Sbjct: 402 DDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAE 576
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22 Identity = 68/186 (36.56%), Postives = 108/186 (58.06%), Query Frame = 2 Query: 20 EDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSE---EFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 +DLPKL++ L+++AK D V I EE+GEH+++G GELH+E+ + + + G E+ +P+V +RE V S V KSPNKHNRLY A PL+E + A +G I D K K + E G +++ AK++ N++++M +G+ L+E ++ ++ GF+ A K G LA E Sbjct: 404 KDLPKLIDVLRQIAKEDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDAGVEVDVGEPIVVYREAVNGVSPE-VEGKSPNKHNRLYFVAEPLDECVYNAHVEGLIKDEDFKKKTPKEVETKLVEIGMNREEAKRVMTI----YEGNVLLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAE 583
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.995e-20 Identity = 60/199 (30.15%), Postives = 104/199 (52.26%), Query Frame = 2 Query: 23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTV-MSKSPNKHNR-------LYMEARPLEEGLAEAIDDGRIGP----------RDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 +LPKL++ L +++K P V+ +EESGEH++ G GEL+++ L DL+ + EI SDP+ F E+ +S ++ +S S ++ + + A P++ + + + +G D+P+ SKIL E+GWD ++ +W F N + + L++ K+ ++ GF WA KEG LAEE Sbjct: 614 ELPKLLDALNKISKYYPGVIIKVEESGEHVILGNGELYMDCLLYDLRASY-AKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYGWDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEE 811
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16 Identity = 59/189 (31.22%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 23 DLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEE-------FGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 DLPKL+E LK + K DP + I+ ESG+ +++G G+LHLEI +++DF +II S+P+V +RE+V + V KSPNK N+ Y+ + + L + + ++ + P+ + K ++E+ G+ ++ A++ E NM DM +G+ ++ E+ D V+ F G +A E Sbjct: 415 DLPKLIEVLKLIQKEDPTLKVEIDQESGQILISGLGDLHLEIVEYRIKNDFK--VDIITSNPIVVYRESV-KGQAGPVEGKSPNKLNKFYITVEKMPDELYWKLRE-KLLKGELPEGKIKKMNEDIIKHLMSLGFTREEAQRCKVIYRE----NMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWE 595
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15 Identity = 63/258 (24.42%), Postives = 111/258 (43.02%), Query Frame = 2 Query: 23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKI-----------LSEEFGWD--------------KDLAKKIWCFGPETTGPNMVVDMCKGVQ----------------YLNEIKDSVVAGFQWASKEGALAEE 565 ++P+LV+G+K L ++DP V I+E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRET+ + S + +PNK L + A PL E + + +++ R + S + ++E W+ +++ +IW FGP GPN++V+ + Q ++ +S+V+GFQ A+ G + EE Sbjct: 629 EMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEE 885
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.905e-15 Identity = 67/258 (25.97%), Postives = 107/258 (41.47%), Query Frame = 2 Query: 23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEG-----------------LAEAIDDGRIGPRDDPKARSKILSEEFGWDKDL--------AKKIWCFGPETTGPNMVVDMCKGVQ----------------YLNEIKDSVVAGFQWASKEGALAEE 565 ++P+LV+G+K L ++DP V I+E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRET+ + S + +PNK L + A PL E L ++++GR K + KI + +K L +IW FGP GPN++V + Q + +S+V+GFQ A+ G + EE Sbjct: 629 EMPQLVKGMKLLNQADPCVQVLIQETGEHVLVTAGEVHLQRCLDDLRERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGRQQKVAVIHQTKEEQSKIPEGIHVDSDGLITIPTPNKLATLSVRAIPLPEEVTRILEENSDLIRSMELLTSSLNEGRNTQAIHQKTQEKIWEFKGKLEKHLTGRKWRNTVDQIWSFGPRKCGPNILVSRSEDFQNSVWSGPAGRESKEASRFRDFGNSIVSGFQLATLSGPMCEE 885
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.207e-14 Identity = 69/244 (28.28%), Postives = 105/244 (43.03%), Query Frame = 2 Query: 11 IRHEDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV-------------------------------------------LEKSCRTVMSKSPN--KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEE---FGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYL-----------NEIKDSVVAGFQWASKEGALAEE 565 +R ++ KLV GL L ++DP V +EE+GEH++ AGE+HLE CLKDL++ F EI S P+V +RET L K +T+ + S N K NR + + L + + E + P + SK+L EE G K+ I FGP+ GPN++ D K ++ +++ + VV FQ + +G L E Sbjct: 571 VRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERF-AKIEIQASQPLVPYRETTIATPDLLAKNKELSIGFVTATLPVGGVTIGITVTPLSGSVVDFLLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLT-----PEKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAE 808
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13 Identity = 63/225 (28.00%), Postives = 97/225 (43.11%), Query Frame = 2 Query: 23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS----------------------------------CRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLA---KKIWCFGPETTGPNMVV-------DMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565 ++ KLV GLK L ++DP V +E +GEHI+ AGELHLE CLKDL + F G EI S+P + +RET L S +S+ N + + + + E+ + + A +++++E + L+ K+ FGP G N+++ + +G E DS+ GFQ A EG LA E Sbjct: 690 EMSKLVRGLKLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTERF-AGIEITHSEPAIPYRETFLSASDMNPPQNSQLGRGVHELLLSQYKITFRTFPLSGKVTDFLSQHQNSIKNILKTSTSSMDPVIESTGSSFLDKKSLLVAFEEVINQEEKSRELLSGFKVKLAGFGPSRVGCNILLSQDNLLGSLFEGTPAAFEYSDSIKNGFQLAVSEGPLANE 913 The following BLAST results are available for this feature:
BLAST of CX294907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294907 ID=CX294907; Name=CX294907; organism=Citrus clementina; type=EST; length=621bpback to top |