CX294908

Overview
NameCX294908
Unique NameCX294908
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length589
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_DESRM (S-adenosylmethionine synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=metK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.055e-39
Identity = 90/165 (54.55%), Postives = 108/165 (65.45%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRP-EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 570
            M   LFTSESV EGHPDK+ DQISDA+LD+ L +DP ++VACET   T +V+V GEI+ +  VD  K+VR+T   IG+     G D D C VL  I++QSPDIA GV        G  T+   E IGAGDQG MFGYATDET E MPL   LA  +  RL+EVRK
Sbjct:    1 MSRKLFTSESVTEGHPDKVADQISDAILDSILAKDPMARVACETFVTTGLVLVGGEISCQCYVDIPKVVRETILEIGYTRAKYGFDGDTCAVLTAIDEQSPDIAMGVDKALEAKTGETTEAEIEAIGAGDQGMMFGYATDETPELMPLPISLAHTMARRLSEVRK 165          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.055e-39
Identity = 85/163 (52.15%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            M  +LFTSESV EGHPDK+ DQISDA+LDA L QD  S+VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV+  +       GAGDQG MFGYA DET   MPL   L+ ++  R   +RKD    W
Sbjct:    1 MSDYLFTSESVGEGHPDKVADQISDAILDAILAQDKHSRVAAETLCNTGLVVLAGEITTNANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGVNAAYDDNLGQ-GAGDQGLMFGYACDETPSLMPLPIYLSHRMVERQAMLRKDGRLPW 162          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_MYCMS (S-adenosylmethionine synthetase OS=Mycoplasma mycoides subsp. mycoides SC GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 81/163 (49.69%), Postives = 111/163 (68.10%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            +E  LFTSESV+EGHPDK+CDQISDA+LD  L+QD  +KVACE    TN +++ G+I++ A V+YE++ RD  +  G+V D  G++A+ CK+ + IE QSPDIAQGV        + IGAGDQG MFGYAT+E+  ++PL+  +A +L    T  RK     W
Sbjct:    5 IEKRLFTSESVSEGHPDKICDQISDAILDEVLKQDKNAKVACEVFATTNYLLIGGQISSTAIVNYEQVARDVLKKNGYVDDAYGINANTCKIDIKIESQSPDIAQGVE----LSNDQIGAGDQGIMFGYATNESKTYLPLAITIAHELVYNATSQRKKGLFKW 163          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 87/164 (53.05%), Postives = 108/164 (65.85%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            M  +LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T +V++ GEITT A VDY  + R+T + IG+ + D+G DA  C VLV  ++QSPDIAQGV+ G      +  GAGDQG MFGYA DET   MP     A +L  R  E+RKD    W
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQISDAILDAILTQDKHARVAAETLVNTGLVVLAGEITTHANVDYIHVARETIKRIGYNTSDLGFDAKGCAVLVGYDKQSPDIAQGVNEGQGIDLNQ--GAGDQGLMFGYACDETPTLMPFPIYYAHRLVQRQAELRKDGRLPW 162          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_HAES2 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 2336) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 87/163 (53.37%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  R  +VRK     W
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILRQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDIGFDGHSCAVLNAIGKQSSDINQGVD---RESPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMERQAQVRKKGILDW 160          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_HAES1 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 129Pt) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 87/163 (53.37%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  R  +VRK     W
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILRQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDIGFDGHSCAVLNAIGKQSSDINQGVD---RESPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMERQAQVRKKGILDW 160          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_DIAST (S-adenosylmethionine synthetase OS=Diaphorobacter sp. (strain TPSY) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 86/155 (55.48%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKD 573
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H +    + GAGDQG MFGYA DET E MP     A +L  R  ++RKD
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKD 158          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 86/155 (55.48%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKD 573
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M  + GEI TK   D  ++VR T R+IG+ S ++G D   C V+ +I++QS DIAQGV       PED GAGDQG MFG+A DET   MP     A +L  RLT+VRKD
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGVD---RGNPEDQGAGDQGMMFGFACDETPTLMPAPIYWAHQLSQRLTQVRKD 159          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 87/160 (54.37%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            +LFTSESV+EGHPDK+ DQISDA+LDA L QD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R+D    W
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNN-LDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPW 163          
BLAST of CX294908 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.378e-39
Identity = 87/160 (54.37%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKDSTCSW 588
            +LFTSESV+EGHPDK+ DQISDA+LDA L QD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R+D    W
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNN-LDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPW 163          
The following BLAST results are available for this feature:
BLAST of CX294908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESRM1.055e-3954.55S-adenosylmethionine synthetase OS=Desulfotomaculu... [more]
METK_DECAR1.055e-3952.15S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_MYCMS1.378e-3949.69S-adenosylmethionine synthetase OS=Mycoplasma myco... [more]
METK_LARHH1.378e-3953.05S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_HAES21.378e-3953.37S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_HAES11.378e-3953.37S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_DIAST1.378e-3955.48S-adenosylmethionine synthetase OS=Diaphorobacter ... [more]
METK_DESVM1.378e-3955.48S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_BURTA1.378e-3954.38S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_BURPS1.378e-3954.38S-adenosylmethionine synthetase OS=Burkholderia ps... [more]

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Properties
Property NameValue
Genbank descriptionC05057D04SK PhIFruit1 Citrus clementina cDNA clone C05057D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294908 ID=CX294908; Name=CX294908; organism=Citrus clementina; type=EST; length=589bp
CTCGTGCCGAATTCGGCACGAGGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAAGATAGTACCTGCTCTTGGC
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