CX294917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.242e-23 Identity = 59/173 (34.10%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 +++ LV D G+ V+AG+AG+D P+ FP+ +G R + +M G K G + + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T +MFE +++PA ++ AVL+ +A+GR+TG++LDSG + +P Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIP 181
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.900e-22 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1 Query: 349 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 483 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.518e-21 Identity = 60/165 (36.36%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 166 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 ++ D+G+G +KAG AG + P+ VFP+IV P + V +G + T YPIE G + NW+ ++ +W N R E PV++TE PL A+R+KM I+FE +VP++ +A Q +SLYASG TG+V+DSG G++ P Sbjct: 6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD----------TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQP 159
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20 Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 163 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVP 636 PLV DNG+ ++AG+ G+ P+ VF ++V R R + + VG++ + G ++ + P E ++SNWD ME++ +TF +L + EHP+ +TE NP R MT ++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P Sbjct: 26 PLVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIP 181
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 139 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 498 M +++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18 Identity = 52/169 (30.77%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY-------VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 +++ LV D G+ + G+AG+D P+ V + G V + + VGD A + + +P+ GIV++WD ++ IW ++ L + HP++LTE N +AN+ K I FE+ VPA Y+ AV S +A+G+ +VLD G V+ P Sbjct: 14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTP 181
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG 612 +++ +V D G+ + GF+G+D P+ V PS G + G + Y+ +S G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K MFE+ PA Y+A Q + +ASG+ T ++D G Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIG 154
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.620e-17 Identity = 48/164 (29.27%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 E+I LV D G+ + G+AG+++P + PS + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ FE +VPA Y+ QAV +A+ ++T +++D G + P Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTP 165
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.470e-16 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 349 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 +PI+HG+V +WD +E +W L+V PE+ PVL++++P P REK+ ++FE VPA ++A A+L+L + G +G+ +++G GV H P Sbjct: 37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATP 132
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.470e-16 Identity = 61/162 (37.65%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 157 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 ++ LV D G+ +KAG A D +P + PS + R MV G A D + +TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MFETFNV Y + QAVLSLYA GR +G +D G G P Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAP 152 The following BLAST results are available for this feature:
BLAST of CX294917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 456
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294917 ID=CX294917; Name=CX294917; organism=Citrus clementina; type=EST; length=638bpback to top |