CX294917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 ++I +V D G+ G++G D P+A+ PS G+ G+KD +++ R + +++G V +W+ EK W +ELR P LLTE N + NR+K ++ E+ + A Y+ A +A GR T +V+D G V+ P Sbjct: 12 DEITAVVIDPGSFTTNIGYSGTDCPQAILPSCYGKYTE-------GEKDELFSEQSIGLPRKDYEIHNIVQNGEVVDWEKAEKQWDWAIRSELRFETNSGMPALLTEPIWNSEENRKKSLEVLLESMDFSACYLVPTATAVSFAMGRPTCLVVDIGHDVTSVCP 168
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.197e-12 Identity = 46/165 (27.88%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 163 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLY---ASGRTTGIVLDSGDGVSHTVP 636 P+ D G+ ++AGF P +FP+ + + R + + +VG++ + + + + P + V+NW+ E+I +TF++ L V P+ +P+LLTE ++ R I+FET+NVP + I ++ S Y SG TG+V+ G ++ +P Sbjct: 39 PIAIDFGSSKLRAGFVNHATPTHIFPNALTKFRDRK----LNKNFTFVGNDTLLDQAVRSQSRSPFDGPFVTNWNLTEEILDYTFHH-LGVVPDNGIPNPILLTERLATVQSQRTNWYQILFETYNVPGVTFGIDSLFSFYNYNPSGNKTGLVISCGHEDTNVIP 198
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP4_YEAST (Actin-related protein 4 OS=Saccharomyces cerevisiae GN=ARP4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 45/163 (27.61%), Postives = 73/163 (44.79%), Query Frame = 1 Query: 151 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 636 +++ +V D G+ G++G D P+++ PS+ G+ G K + R LK IE+G+V +WD ++ W NEL + P LLTE N NR+K ++ E A Y+A + +A+GR +V+D G P Sbjct: 12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK-----YTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSP 169
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP5_AEDAE (Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 44/165 (26.67%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 166 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ---KDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVP 636 +V DNG+ +AG+AG D P VF +++ +PR + +G++ + + L+ + +V++ E+I+ + F L + + HPVLLTE NP +R M+ +MFE + +P + A+ +LS + G+ +G+++ G +H +P Sbjct: 30 IVIDNGSYHCRAGWAGKDVPSLVFKNVLAKPRKDRSKKDTSEVVVPTVQIGNDITNIEAVRFQLRTQFDRNVVTHLHVQEQIFDYLF-GRLGINADGCVPHPVLLTECVANPNYSRMLMSELMFECYGIPGIVYAVDGLLSYRMNGGQDSGLIVSCGYQATHVIP 193
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP5_CHICK (Actin-related protein 5 OS=Gallus gallus GN=ACTR5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11 Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 163 PLVCDNGTGMVKAGFAGDDA-----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVSHTVP 636 PLV DNG+ +AG+A D P F S+ R R G G G + VG++ S + L+ P + + + E ++ H F L VA + +HP++LTEA NP +R+ M+ ++FE + VP + + ++ S Y + R +G+V+ SG +H +P Sbjct: 33 PLVIDNGSFQTRAGWAAADPSVPAEPLLRFRSLAARSR--GARGGAGA-ETQVGNDLGSPEPLRWLLRSPFDRNVPVQLELQELLFDHVF-QRLGVASQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYQVPKVSYGVDSLYSFYHNRRQNWPCSGLVISSGYQCTHILP 199
BLAST of CX294917 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 52/168 (30.95%), Postives = 75/168 (44.64%), Query Frame = 1 Query: 166 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNVPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVP 636 L+ DNG +KAG +G D V P+ + R R +K YVGDE + + + + Y P E G++ NWD IW F + L + P E +L+TE N E ++FE F + + A L LY S + IV+D G +H VP Sbjct: 7 LIIDNGAYEIKAGISGVDWEPRVLPNSIARSR--------TEKRVYVGDEIDNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVP 166 The following BLAST results are available for this feature:
BLAST of CX294917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 456
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294917 ID=CX294917; Name=CX294917; organism=Citrus clementina; type=EST; length=638bpback to top |