CX294922

Overview
NameCX294922
Unique NameCX294922
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10023 contig Ccv1_Contig10023:366..936. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   40 LELYMNDISGKIPKELGNLKSLVS-MDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENN 342
            L+L  N+ SG +P  +  L  LV+ +D+  N   GEIP   +N+  L  L L +N+ TG++P +L  L  LK F VS+N L G IP       F  E F NN
Sbjct:  105 LDLSRNNFSGPLPANISTLIPLVTILDLSYNSFSGEIPMLISNITFLNTLMLQHNQFTGTLPPQLAQLGRLKTFSVSDNRLVGPIPNFNQTLQFKQELFANN 206          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 44/98 (44.90%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    1 LVPNSARGQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 294
            L PN      L  + +  N + GKIP EL N K LVS+ +  N   GEIP S A+L  L +L L++N LTG IP+ L  L  L +F+VS NGL G +P
Sbjct:  405 LPPNFCDSPVLSIVNISHNRLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNLK-LALFNVSFNGLSGEVP 500          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 1
Query:   22 GQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 294
            G  LQ L L  N   G IP ELGNL +L  +D+++N L G IP SF     L+ L L+ N+LTGSIP     L  L V D++ N L G +P
Sbjct:  158 GSSLQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVP 246          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   55 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLC-GTIPVDGPFRSFPMESFENNKLNGPELQGLVP 378
            N  +G IP+ LG +++L  + + +N+L G+IP S  NL +L+ L L++NK TGS+P  LT+L+ L   DVSNN L    +P   PF    + S    +L   +L G VP
Sbjct:  231 NQFTGSIPESLGLVQNLTVLRLDRNRLSGDIPSSLNNLTNLQELHLSDNKFTGSLP-NLTSLTSLYTLDVSNNPLALSPVPSWIPF----LNSLSTLRLEDIQLDGPVP 334          

HSP 2 Score: 68.5514 bits (166), Expect = 2.559e-11
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 1
Query:   31 LQYLELYMN-DISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV-DG---PFRSFPMES----FENNKLNG 354
            LQ L+L  N ++SG +P  +GNL+ L  + +      G IP S  NL+ L  L LN NK +G+IP  +  LS L  FD+++N L G +PV DG   P     +++    F NNKL+G
Sbjct:   94 LQTLDLTGNPELSGPLPANIGNLRKLTFLSLMGCAFNGPIPDSIGNLEQLTRLSLNLNKFSGTIPASMGRLSKLYWFDIADNQLEGKLPVSDGASLPGLDMLLQTGHFHFGNNKLSG 210          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 1
Query:   10 NSARGQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 294
            N +    +  L+L  + ++GKI  ++ NL  L  +D+  NKL G +P+  AN+KSL F+ L+NN L GSIP+ L    +LK+    N  LC T P
Sbjct:  409 NMSTSPRIISLDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNLKLEFEGNPKLCATGP 503          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 1
Query:   31 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKL 348
            LQ      N I G +P EL  L  L  MD+  N + G IP++  N+ SL  L L+ NKLTG IP  ++ L  L  F+VS N L G +P     + F   SF  N L
Sbjct:  272 LQDFSFSHNRIRGTLPSELSKLTKLRKMDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVPT-LLSQKFNSSSFVGNSL 376          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1
Query:   28 HLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGL 372
            +LQ ++LY N ISG+IP   GN+  L  + +  N   G IP+S    + L  L ++ N+L G+IP+E+  +  L   D+SNN L G  P + G            NKL+G   Q +
Sbjct:  418 NLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAI 533          

HSP 2 Score: 69.3218 bits (168), Expect = 1.500e-11
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 1
Query:   16 ARGQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANL-KSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGL 372
            AR   + + ++ +N  SG  P  L N+ SL S+ +  N   G +   F  L  +L+ L L  N+ TG+IP+ L  +S L+ FD+S+N L G+IP+  G  R+       NN L      GL
Sbjct:  214 ARLTQMVFFQIALNSFSGGFPPALYNISSLESLSLADNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSIPLSFGKLRNLWWLGIRNNSLGNNSSSGL 334          

HSP 3 Score: 67.781 bits (164), Expect = 4.366e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1
Query:   31 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVP 378
            L Y++L  N ++G  P+E+G L+ LV +    NKL G++P++     S++FL +  N   G+IP +++ L  LK  D SNN L G IP      S P  S  N  L+  + +G VP
Sbjct:  491 LAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAIP-DISRLVSLKNVDFSNNNLSGRIP--RYLASLP--SLRNLNLSMNKFEGRVP 601          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   31 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPE 360
            L  L L  N +SG++P ELGNL ++  M +  N   GEIP +FA L +L+  R+++N+L+G+IP  +   + L+   +  +GL G IP+        ++    + LNGPE
Sbjct:  136 LTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPI-AIASLVELKDLRISDLNGPE 244          

HSP 2 Score: 68.5514 bits (166), Expect = 2.559e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query:   55 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 294
            N ++G IPKE GN+ +L S+ +  N+L GE+P    NL +++ + L++N   G IP     L+ L+ F VS+N L GTIP
Sbjct:  120 NRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 1
Query:   28 HLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 354
            +LQ+L +   ++SG IP  L  ++SL S+D+  N L G IP SF++L +L+ L L +NKLTG IP  L      +   +S N L G IP D            +N+L G
Sbjct:  121 NLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPRDDAQDEINTVDLSHNRLTG 228          
BLAST of CX294922 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   28 HLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQ 366
            +L++L L  N  SG+IP+ L +L  LV +++  N   GEI   F NL  LK L L NN+L+GSIP +L     L  F+VSNN L G+IP +   + F  +SF    L G  L+
Sbjct:  122 NLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP-DLDL--PLVQFNVSNNSLNGSIPKN--LQRFESDSFLQTSLCGKPLK 229          
The following BLAST results are available for this feature:
BLAST of CX294922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
Y5838_ARATH5.157e-1239.22Probably inactive leucine-rich repeat receptor-lik... [more]
Y5694_ARATH6.735e-1244.90Probably inactive leucine-rich repeat receptor-lik... [more]
TMM_ARATH6.735e-1245.05Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
Y5977_ARATH8.796e-1239.45Probable leucine-rich repeat receptor-like protein... [more]
Y5169_ARATH8.796e-1238.95Probable LRR receptor-like serine/threonine-protei... [more]
IMK3_ARATH8.796e-1239.62Probable leucine-rich repeat receptor-like protein... [more]
EFR_ARATH8.796e-1234.48LRR receptor-like serine/threonine-protein kinase ... [more]
Y1534_ARATH1.149e-1135.45Probable LRR receptor-like serine/threonine-protei... [more]
PGIP1_ORYSJ1.149e-1137.61Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]
Y1848_ARATH1.500e-1141.59Probable inactive receptor kinase At1g48480 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05057E10SK PhIFruit1 Citrus clementina cDNA clone C05057E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294922 ID=CX294922; Name=CX294922; organism=Citrus clementina; type=EST; length=571bp
CTCGTGCCGAATTCGGCACGAGGCCAGCATCTGCAGTACTTGGAGCTTTA
CATGAATGACATAAGTGGGAAAATTCCGAAAGAGTTAGGTAATTTGAAAA
GCCTTGTCAGCATGGATATGTATCAGAATAAACTGGAAGGAGAAATACCA
AAGTCCTTTGCCAATTTGAAGTCACTTAAATTTCTGCGGTTGAACAACAA
CAAACTAACAGGATCAATTCCGAGGGAGCTGACCACCCTGTCGGACCTCA
AAGTTTTTGATGTTTCTAACAATGGTCTCTGTGGGACAATCCCTGTTGAT
GGTCCTTTTAGAAGCTTTCCTATGGAGAGTTTTGAAAATAATAAACTCAA
TGGACCAGAGCTGCAAGGACTGGTGCCTTATGATTTTGGATGCTGAAGAA
GGTTGAAAACCCTCCGTCTTCTATTGAAGACCATAATGTTAAAGACTCGT
ATAGGGTAAAATTATATCGTGTGCATCAGCTTGATCGAATGGCTAGATAT
ATTATGTCAGCGGCAGTGACTGTTCATGTATGAAGTAACTAAAGCAATTA
AAATAAGATTATGTAAGCTTA
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