CX294924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYS 623 LG GL VS GLG +G + L+ A ++GI L DT+++Y E++LG +K G R + + TK + GK E RG + +ASL+RL ++ +D+ + +R D P+E T+ + ++ +G Y G S S+ I A++V P Q E+ ++ R+ VE ++ ++G+G + +S Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKI---FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWS 244
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYS 623 LG GL VS GLG +G + L+ A ++GI L DT+++Y E++LG +K G R + + TK + GK E RG + +ASL+RL ++ +D+ + +R D P+E T+ + ++ +G Y G S S+ I A++V P Q E+ ++ R+ VE ++ ++G+G + +S Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKI---FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWS 244
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYS 623 LG GL VS GLG +G + L+ A ++GI L DT+++Y E++LG +K G R + + TK + GK E RG + +ASL+RL ++ +D+ + +R D P+E T+ + ++ +G Y G S S+ I A++V P Q E+ ++ R+ VE ++ ++G+G + +S Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKI---FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWS 244
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13 Identity = 49/173 (28.32%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 150 SGITLLDTSDIYGPHTNEILLGKALKGG-MRERVELATKFGISYADGKREIRGDPAY---------ARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRA------HAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAY 620 +G +DT++ Y +EI +G+ +K +R+++ +ATKF Y K E+ G + + SL++L D ID+ Y H D IE + L LV++GK+ Y+G+S+ A + A H P + Q +W++ +RD E +I+P R G+ + + Sbjct: 19 AGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYK--KYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPW 189
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: AAD14_YEAST (Putative aryl-alcohol dehydrogenase AAD14 OS=Saccharomyces cerevisiae GN=AAD14 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.224e-12 Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = 3 Query: 21 RIKLGSQGLEVSAQGLGCMGM----SAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGG-MRERVELATKFGISYADGKREIRGDPAY---------ARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRA------HAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAY 620 R+ + G+ VS LG + S F G E L+ +G +DT++ Y +EI +G+ + +R+++ +ATKF Y K E+ G + + SL++L D ID+ Y H D IE + L LV++GK+ Y+G+S+ A + A H P + Q +W++ +RD E +I+P R G+ + + Sbjct: 19 RVLSKTAGIRVSPLILGGASIGDAWSGFMGSMNKEQ-AFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMASRKLRDQIVIATKFTGDYK--KYEVGGGKSANYCGNHKRSLHVSVRDSLRKLQTDWIDILYIHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSVYQGKWNVLNRDFERDIIPMARHFGMALAPW 235
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12 Identity = 68/234 (29.06%), Postives = 105/234 (44.87%), Query Frame = 3 Query: 27 KLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIY----GPHT---NEILLGKAL-KGGMRERVELATKFGISYADGKREIRGDPAY----ARAACEASLKRLDIDCIDLYYQH---------------RIDTRVPIEV--TIGELKKLVEEGKIKYIGLSEASASTIRR------AHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYS 623 ++ LEVS GLG M +G E+D A + +A+ GI L+D +++Y P T E +G L K G RE++ +A+K + + IR D A R A SLKRL D +DLY H D+ + + T+ L + GKI+YIG+S +A + R H + I +Q +SL +R E + + G+ ++AYS Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYS 234
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12 Identity = 68/234 (29.06%), Postives = 105/234 (44.87%), Query Frame = 3 Query: 27 KLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIY----GPHT---NEILLGKAL-KGGMRERVELATKFGISYADGKREIRGDPAY----ARAACEASLKRLDIDCIDLYYQH---------------RIDTRVPIEV--TIGELKKLVEEGKIKYIGLSEASASTIRR------AHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYS 623 ++ LEVS GLG M +G E+D A + +A+ GI L+D +++Y P T E +G L K G RE++ +A+K + + IR D A R A SLKRL D +DLY H D+ + + T+ L + GKI+YIG+S +A + R H + I +Q +SL +R E + + G+ ++AYS Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYS 234
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: YEZB_SCHPO (Uncharacterized oxidoreductase C3A11.11c OS=Schizosaccharomyces pombe GN=SPAC3A11.11c PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12 Identity = 54/185 (29.19%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 102 PKPESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKG--GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRL-----DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYS 623 P P+ + ++++A++ G + D + YG P N LL + + ++V L+ K ++ + G R S+K + + IDLY ID PIE T+ LK+ V+ G I+ IGL E S I+RAH+V I A+++ +S+ R++E + C +L I +VA+S Sbjct: 25 PVPDEEAFRIMNYALSHGCSFWDAGEFYGLSEPLANLQLLSRYFQKFPDSIDKVFLSVKG--AFDPETHRVHG----TRECITKSIKTVRETLKKVKTIDLYQCAAIDPDTPIEETMACLKEFVDSGDIRCIGLCEPSVEEIKRAHSVVRIAAIEVHYSMLFREIEYNGVKKLCHDLSIPLVAHS 203
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12 Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACE---ASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAH-------AVHPITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYS 623 LG GL+VSA LG G + + A + GI DT++IY +E ++GKA+K +R E + + G + + E ASLKRL + +D+ HR D VP+E + +L+++GK Y G SE SA I AH + P+ A Q +++ +RD E +++P + G G +S Sbjct: 18 LGRSGLKVSAFSLG--GWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV-ADQPQYNYLTRDHFEKDLLPLQQIYGYGATVWS 223
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12 Identity = 58/213 (27.23%), Postives = 95/213 (44.60%), Query Frame = 3 Query: 15 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIA--LIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYS 623 +K LG GL VS C+G+ + SD +A L+ A G+ L DT+++Y E LGK LK R I + RG + SL+RL +D +D+ + +R+D P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +S Sbjct: 71 MKYRNLGKSGLRVS-----CLGLGTWVTFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVETQLPELYHKIGVGSMTWS 278 The following BLAST results are available for this feature:
BLAST of CX294924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294924 ID=CX294924; Name=CX294924; organism=Citrus clementina; type=EST; length=624bpback to top |