CX294932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.983e-41 Identity = 81/151 (53.64%), Postives = 113/151 (74.83%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI +ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ + + +RPFG++LLI G D + L+ TDPSG Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---TQHGGARPFGLALLITGIDRHSARLFETDPSG 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.983e-41 Identity = 85/151 (56.29%), Postives = 111/151 (73.51%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNLPRLFETDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.897e-41 Identity = 81/151 (53.64%), Postives = 110/151 (72.85%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+GRLFQVEYA EA+K G+T++G+K+KEG+VL V+KR TS L+EP S+EKI +IDEHIG A SGL+ADAR ++E AR+E Q +R +Y EP+ VES + +CD+ + + RPFG +L+I G + G L+ TDPSG Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMY---TQHGGVRPFGTALIIGGVNGRGCRLFETDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.897e-41 Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 3 Query: 87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 M L + YDR + FSP+GRLFQVEYA EA+K G+TAIG+K KEGV+L +KR+ S LLE ++EKI +IDEHI A SGL+ADAR L++ AR+E Q +R +Y EP+TV+ + +CD ++ + RPFGVSLLIAG DE P LY TDPSG Sbjct: 1 MHLPQMGYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQY---TQYGGVRPFGVSLLIAGVDE-VPKLYETDPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.134e-40 Identity = 80/151 (52.98%), Postives = 112/151 (74.17%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSPEGRL+QVEYA EA++ G+TA+G+K +GVVLAV++RITS L++ SS+EKI +ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ + + +RPFG++LLI G D + L+ TDPSG Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---TQHGGARPFGLALLITGIDRHSARLFETDPSG 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.934e-40 Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+GRLFQV YA EA+K G+TA+G+K KEGVVLAVEKRITS L+EPSS EKI +ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL + RPFG +LL+AG ++ P LY TDPSG Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNDK-PELYETDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.934e-40 Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K EGVVL V+KR+TS LLEP S+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY EP+ VE + LCD + + +RP+G +LLIAG + L+ TDPSGT Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTY---TQFGGARPYGTALLIAGVSDGEARLFETDPSGT 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.526e-40 Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.299e-40 Identity = 80/151 (52.98%), Postives = 111/151 (73.51%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSPEGRL+QVEYA EA++ G+TAIG+ K+GVVLAV++RITS L++ S+EKI +ID+H+ A SGL+ADAR L++ AR+E Q +R +YGE +++E + +CD+ + + RPFGVSLLIAG D+N L+ TDPSG Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAY---TQHGGVRPFGVSLLIAGIDKNEARLFETDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.308e-40 Identity = 86/151 (56.95%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+GRLFQV YA EA+K G+TA+G+K EGVVLAVEKRITS L+EP S EKI +ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL + RPFG +LL+AG +E P LY TDPSG Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH---TQYGGVRPFGAALLMAGVNEK-PELYETDPSG 156 The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bpback to top |