CX294932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.061e-38 Identity = 76/152 (50.00%), Postives = 111/152 (73.03%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T +G+VLA +KR SPL+EP+SVEKI + D+H+G A +G +ADAR L++ AR + Q +R YGEP+ +E+ T+ + D ++ + +RPFGV+LLI G ++ P LY TDPSGT Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQY---TQVGGARPFGVALLIGGIEDGSPRLYETDPSGT 158
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.087e-38 Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +GVVL V+KR++S LLE SS+EKI +IDEHIG A SGL+ DAR LV+ AR+E Q +R SY E + VE+ + LCD + RP+G +LLIAG + L+ TDPSGT Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCD---HMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGT 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38 Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 72 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T +GVVLAV+KRI SPL+E SSVEKI + D+HIG A +G +ADAR L++ AR + Q ++ YGEP+ VE+ T+ + D ++ + +RPFGV+L+I G P L+ TDPSGT Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQY---TQVGGARPFGVALIIGGIVNGEPRLFETDPSGT 158
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.266e-38 Identity = 78/152 (51.32%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T++GVVL V+KRI SPL+E +SVEKI + D+HIG A +G +ADAR L++ AR + Q ++ Y EP+ VE+ T+A+ D ++ + +RPFGV+L+I G ++ P LY TDPSGT Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQY---TQVGGARPFGVALIIGGIEDGEPRLYETDPSGT 158
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.532e-37 Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 72 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGT 158
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.532e-37 Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 72 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGT 158
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.614e-37 Identity = 74/152 (48.68%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T++GVV+A ++ SPL+E S+EKI EID H+G A +G +ADAR L++ AR ++Q +R Y EP +VES T+ + D ++ + +RPFGV+LL+AG ++ P L+ TDPSGT Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQY---TQTGGARPFGVALLVAGIEDGEPRLFETDPSGT 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.823e-37 Identity = 79/151 (52.32%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSPEG+++QVEYA EA+K G +G+K K GVVL EKR S L + SS+EKI IDEH+ + SGL+ADAR L+++AR +HRF Y EP+ VE T+A+C+L ++ + +RPFGV+LLIAG D +G LY TDPSG Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQY---TQFGGARPFGVALLIAGVDRHGARLYQTDPSG 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.173e-35 Identity = 70/151 (46.36%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSG 157
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.173e-35 Identity = 70/151 (46.36%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSG 157 The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bpback to top |