CX294932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33 Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K K+GV L EK++ S L+E +S+EKI ID+ + SGL+ADAR L++ AR+ Q + +YG M +E+ + + D ++ + RP+GVS++ AG D GP L+ DP+GT Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQY---TQYGGVRPYGVSIIFAGLDSIGPRLFDCDPAGT 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.342e-33 Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDR + FSP+GRLFQVEYA EA+K GSTA+GLK GV+L +K+I S L+E +S+EKI ID+++ SGL+ADAR L++ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGT 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.290e-33 Identity = 69/152 (45.39%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K GV+L +K++ S L+E +S+EKI ID+++ SGL+ADAR LV+ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGT 156
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33 Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGT 152
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33 Identity = 74/153 (48.37%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + RPFG+S LI G D +G P LY TDPSGT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRY---TQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGT 152
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33 Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGT 152
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33 Identity = 72/155 (46.45%), Postives = 103/155 (66.45%), Query Frame = 3 Query: 102 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 + YDR + FSP+G LFQVEYA EA+K GSTA+G++ VVL VEK+ + L + +V KI +D+H+ A +GL ADAR ++ ARVE Q+H+ + +P+TVE T+ + L ++ + + RPFG+S LI G D++G P LY TDPSGT Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR---RPFGISALIVGFDDDGIPRLYQTDPSGT 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33 Identity = 72/155 (46.45%), Postives = 103/155 (66.45%), Query Frame = 3 Query: 102 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 + YDR + FSP+G LFQVEYA EA+K GSTA+G++ VVL VEK+ + L + +V KI +D+H+ A +GL ADAR ++ ARVE Q+H+ + +P+TVE T+ + L ++ + + RPFG+S LI G D++G P LY TDPSGT Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR---RPFGISALIVGFDDDGIPRLYQTDPSGT 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.101e-33 Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 3 Query: 99 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSG 560 +T YDR FSPEG L+QV YA EA+K G T++G+KT EGVV+A EKR PL++ ++KI +ID+HIG A +G+ D R L+++ARV T HR YGEP VE + + D+ + + RPFGV+L+ AG + +G + +Y TDP G Sbjct: 9 QTAYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAY---TQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGG 160
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.101e-33 Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSG 560 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + FSY EPM VE Q+LCD + + PFGVS L AG D+N G L+ +DPSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGY---TQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSG 154 The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bpback to top |