CX294932

Overview
NameCX294932
Unique NameCX294932
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length565
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.366e-32
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGT 563
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  S+ KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  +P+TVE  T+ +  L  ++    +    RPFG+S LI G D     P+LY TDPSGT
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGT 154          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 7.366e-32
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGT 563
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  S+ KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  +P+TVE  T+ +  L  ++    +    RPFG+S LI G D     P+LY TDPSGT
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGT 154          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.641e-31
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGT 563
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  SV KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  + +TVE  T+ +  L  ++    +    RPFG+S LI G D   + P+LY TDPSGT
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGT 154          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.641e-31
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGT 563
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  SV KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  + +TVE  T+ +  L  ++    +    RPFG+S LI G D   + P+LY TDPSGT
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGT 154          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.143e-31
Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSG 560
            YDR +  FSP+G L+QV+YA EA+K G T +G+KTK GVVL  EKR  + LL+  S+EK+  +D+H+GC+ +GL +D R L+++AR +   HR  Y EP+ ++  T+ + D+   +    +    RPFGV+L+I G D    P L  T+PSG
Sbjct:   10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMY---TQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSG 158          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.143e-31
Identity = 70/152 (46.05%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSG 560
            YDR V  +SP+G L QVEYA EA++ GST +GL+T   +V+ VEKR    L E   V KI  +D+H+    SGL ADAR LV  A++E Q+HR ++ +P TVE  T+ +  L   + + +     RPFG+S L+ G DE+G P L+ TDPSG
Sbjct:    5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGR---RPFGLSCLVGGFDEDGTPHLFQTDPSG 153          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.143e-31
Identity = 74/155 (47.74%), Postives = 102/155 (65.81%), Query Frame = 3
Query:  105 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESM--SRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            ++ + VNT+S EGR+ Q+EYA++A+ LG+T IG++TKE V+L  EK+I S L  P SV K  +I +HI    SG+  D +T+V+ +R    +H   YGE ++VE   + L  L+LRFGE DE  M   RPFGVSL+IAG D   P LY  DPSG+
Sbjct:    3 DFKQSVNTYSSEGRIHQIEYAMKAMNLGTTTIGVRTKEFVILCSEKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE-PRLYSLDPSGS 156          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.799e-31
Identity = 62/151 (41.06%), Postives = 98/151 (64.90%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560
            YDR +  FSP+G L+QV+YA EA+K G T +G+KTK  VV+  EK+  S LL+  S+EK+  +D+H+GC+ +GL +D R L+++AR  +  HR  Y EP++++  T+ + D+   +    +    RPFGV+L++ G D     L+ T+PSG
Sbjct:   10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMY---TQHGGVRPFGVALIVGGVDRGVTKLFMTEPSG 157          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 1.064e-30
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  102 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMS------GLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGT 563
            + YDR +  FSP+G LFQVEYA EA+K GSTA+G++    VVL VEK+  + L +  +V KI  +D+H+  A +      GL ADAR ++  ARVE Q+H+ +  +P+TVE  T+ +  L  ++ + +     RPFG+S LI G D++G S LY TDPSGT
Sbjct:    3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR---RPFGISALIVGFDDDGISRLYQTDPSGT 160          
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.369e-30
Identity = 67/152 (44.08%), Postives = 101/152 (66.45%), Query Frame = 3
Query:  108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSG 560
            YDR +  FSP+G LFQVEYA EA+K GSTA+G++ K+ +V+ VEK+    L +  ++ KI  ID+H+  A +GL ADAR LV+ AR+E Q+++ +  +P+TV   ++ + +   RF +       RPFG+S+LI G D +G P L+ T+PSG
Sbjct:    4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGR---RPFGISMLIGGFDHDGTPRLFKTEPSG 152          
The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PSA7A_ORYSJ7.366e-3246.75Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ORYSI7.366e-3246.75Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7B_ORYSJ1.641e-3146.75Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7B_ORYSI1.641e-3146.75Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSMA_SULTO2.143e-3143.42Proteasome subunit alpha OS=Sulfolobus tokodaii GN... [more]
PSA73_DROME2.143e-3146.05Proteasome subunit alpha type-7-1B OS=Drosophila m... [more]
PSA5_ENCCU2.143e-3147.74Probable proteasome subunit alpha type-5 OS=Enceph... [more]
PSMA_METS52.799e-3141.06Proteasome subunit alpha OS=Metallosphaera sedula ... [more]
PSA7L_HUMAN1.064e-3044.72Proteasome subunit alpha type-7-like OS=Homo sapie... [more]
PSA7_CAEEL2.369e-3044.08Proteasome subunit alpha type-7 OS=Caenorhabditis ... [more]

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Properties
Property NameValue
Genbank descriptionC05057F12SK PhIFruit1 Citrus clementina cDNA clone C05057F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bp
CTCGTGCCGAATTCGGCACGAGGCTCTAACACAGTTCCGGTATCAACTCT
TAAGCTCAGGTTTCCAGATCCAATCAGCAACAAAACATGTTCCTTACAAG
GACTGAGTATGATAGAGGAGTGAACACTTTCTCTCCAGAAGGAAGATTGT
TTCAGGTCGAATATGCTATTGAGGCCATTAAGCTGGGTTCAACTGCAATT
GGGTTGAAGACGAAAGAAGGGGTTGTGCTTGCTGTCGAGAAACGCATTAC
TTCACCACTGCTGGAGCCCAGCAGCGTGGAGAAGATTATGGAAATTGATG
AGCATATAGGATGTGCTATGAGTGGATTGATTGCTGATGCTCGTACACTT
GTTGAACATGCAAGGGTTGAAACTCAGAATCATAGATTCTCATATGGTGA
GCCAATGACCGTAGAATCTACTACACAAGCACTCTGTGACCTGGCGCTAC
GCTTTGGTGAAGGCGATGAAGAATCCATGTCTCGACCATTTGGAGTATCC
CTTCTTATTGCTGGATCTGACGAGAATGGACCTAGCCTGTACTATACAGA
TCCATCTGGCACATT
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