CX294932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.042e-30 Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSG 560 YD FSPEGRL+QVEYA+EAI +A+G+ +GVVL EK++TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.042e-30 Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSG 560 YD FSPEGRL+QVEYA+EAI +A+G+ +GVVL EK++TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.042e-30 Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSG 560 YD FSPEGRL+QVEYA+EAI +A+G+ +GVVL EK++TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 4.042e-30 Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSG 560 YD FSPEGRL+QVEYA+EAI +A+G+ +GVVL EK++TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.279e-30 Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 99 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL+++ VVLA + S L S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG Sbjct: 3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSG 151
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.279e-30 Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 99 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSG 560 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL+++ VVLA + S L S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG Sbjct: 3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSG 151
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.894e-30 Identity = 68/153 (44.44%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 YDR + FSP+G LFQVEYA EA++ G A+G+K K+ ++ AVEK+ L + + KI ++DEHI A +GL ADAR +V HA++E Q R SY + + V+ + + + R + S SRP+GVS +I G +ENG P L+ T+PSGT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQR---STQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGT 152
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.004e-30 Identity = 64/158 (40.51%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 93 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGT 563 ++ YDR + FSP+G LFQVEYA+EA++ G+ A+G++ K+ +VL VEK+ T+ L + S+ KI+++D+HI +GL AD+R L+ A +E Q++R + + +VE ++ + + R+ + RPFG+S LI G D +G P+LY TDPSG+ Sbjct: 1 MSSARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRY---TQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGS 155
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.176e-29 Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = 3 Query: 108 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSG 560 YDR ++ FSP+G +FQVEYA+EA+K G+ A+G+K K VVL E+R T L + + K+ +ID H+ + SGL AD+R L+E ARVE Q+HR + +P+TVE T+ + + R+ + RPFGVS LIAG D ++ P LY T+PSG Sbjct: 4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY---TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSG 154
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 3.421e-29 Identity = 67/154 (43.51%), Postives = 98/154 (63.64%), Query Frame = 3 Query: 102 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSG 560 + YDR V FSP+G L QVEYA EA++ GSTA+G++ VVL VEK+ + L E V KI +D H+ A +GL ADAR ++ A+VE Q+HR + +P+T+E T+ + L ++ + + RPFG+S LI G D +G + L+ T+PSG Sbjct: 3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGR---RPFGISCLIGGFDADGSAHLFQTEPSG 153 The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bpback to top |