CX294948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37 Identity = 75/94 (79.79%), Postives = 84/94 (89.36%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL DEIGFS D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QVG+F+KF+D+S+ SSSQGG TS G VPVP+LPRL EKV +SMFFC Sbjct: 818 HYHVLHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVPELPRLHEKVRSSMFFC 911
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.144e-36 Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H +L DEIGFS+D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QV F+KFD++SETSSS GG TSAG PVP+LPRL KV +SMFFC Sbjct: 811 HYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC 904
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL DEIGF D++Q+LV SLSYVYQRSTTAISVVAPICYAHLAA+Q+G FMKF++ +ETSS GG+ S+ VP+LPRL VC+SMFFC Sbjct: 790 HYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSSGSGGVPSSSGAVVPELPRLHADVCSSMFFC 883
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.493e-25 Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL DE F+ D+LQELVH+LSYVYQRSTTAIS VAPICYAHLAA+QV F++ DD + S GG A P PVP+LPRL V SMFFC Sbjct: 799 HYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGG---APPRPVPELPRLHPDVRQSMFFC 889
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMK---FDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL+DE F++D LQ L ++L Y Y R T A+SVV P YAHLAA + +++ D S SS + GPV V QLP+++E V + MF+C Sbjct: 962 HYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC 1058
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDL-----SETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VLFDE FS+D LQ L + L Y Y R T ++S+V P+ YAHLAAS+ +++ L S S++ G + VPV LP ++E V MF+C Sbjct: 794 HYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSSSASAAGGSRRNDRGVPVKPLPEIKENVKQFMFYC 892
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL+DE F++DE+Q L ++L Y Y R T ++SVV P YAHLAA + +M+ ++SE ++ T V LP ++EKV MF+C Sbjct: 887 HYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PEMSENQTTSKSSTGTNGTSVKPLPAVKEKVKRVMFYC 979
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSE--TSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 297 H VL DE GF++D+LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ ++S+ +S S+ T G V + QLP +++ V MF+C Sbjct: 904 HYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYME-SEMSDGGSSRSRSSTTGVGQV-ISQLPAIKDNVKEVMFYC 997
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFD--DLSETSSSQGGMTS-------AGPVPVPQLPRLQEKVCNSMFFC 297 H VL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ D D +S +GG +S AG V LP L++ V N MF+C Sbjct: 936 HYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC 1038
BLAST of CX294948 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 16 HEDVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTS------------AGPVPVPQLPRLQEKVCNSMFFC 297 H VL+DE F++DELQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G TS AG V V LP L+E V MF+C Sbjct: 1013 HYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 1118 The following BLAST results are available for this feature:
BLAST of CX294948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294948 ID=CX294948; Name=CX294948; organism=Citrus clementina; type=EST; length=678bpback to top |