CX294957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.250e-34 Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 194 TSALGSSSSGYRKVAAQA--------KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDWASTL*LKG 541 T + SS SG R AA+A K++VAINGFGRIGRNFLRCWHGR+++ L+VVAIND+GGVKQASHLLKYDSTLG F ADVK V ISVDGK I++VS+R+P+ LPW + L ++G Sbjct: 11 TGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEG 134
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.949e-34 Identity = 77/163 (47.24%), Postives = 102/163 (62.58%), Query Frame = 2 Query: 47 MASATLSVAKSALQGNGKG-FSEFSGLRN---SASLPFGRKSS-----DDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPW 508 +A+ + S Q G+ F++FSG++ S+ L + S D + + S + +++ G K++VAINGFGRIGRNF+RCW GR DS +EVV INDT GVK ASHLLKYDS LG F+ADV G D ISV+GK I++VSNRNP+ LPW Sbjct: 7 VATVRATTKSSVCQVQGRSTFAQFSGMKKVNQSSRLQPAQSGSAFGGYSDANDAFYTRVSGIVAATFG-----PTMKVRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTSGVKTASHLLKYDSILGTFDADVS-AGEDTISVNGKTIKIVSNRNPLQLPW 163 HSP 2 Score: 31.5722 bits (70), Expect = 3.949e-34 Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREG 567 P Q P + ID+V+E TGVFVD G Sbjct: 158 PLQLPWKEMNIDIVVEATGVFVDAPG 183
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.736e-28 Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 254 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDW 517 +VAINGFGRIGRNFLRCW GR DS LEVV INDT + +HLL+YDS LG +AD+ + I+V+GK I+ VS+RNP+NLPW +W Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGINDTSDPRTNAHLLRYDSMLGKLDADIS-ADENSITVNGKTIKCVSDRNPLNLPWAEW 89 HSP 2 Score: 30.0314 bits (66), Expect = 4.736e-28 Identity = 14/28 (50.00%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREGGS 573 P P +DLVIE TGVFV EG + Sbjct: 81 PLNLPWAEWNVDLVIEATGVFVTHEGAT 108
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 2 Query: 266 NGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDWASTL*LKG 541 NGFGRIGRNFLRC R++S LEV+AIND+GGVKQASHLLKYDSTLG F+ADVK V ISV+GK I+VVS+R+P LPWG+ L ++G Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDADVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEG 92
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.847e-25 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDW 517 ++VAINGFGRIGRNF RCW GR+++ +E+VA+NDT + +HLLKYDS LG + + I+V+GK I+ VS+RNP NLPW +W Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEW 90 HSP 2 Score: 30.4166 bits (67), Expect = 5.847e-25 Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREGGS 573 P P IDL+IE TGVFV +EG + Sbjct: 82 PENLPWKEWEIDLIIEATGVFVSKEGAT 109
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 9.904e-25 Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDW 517 ++VAINGFGRIGRNF RCW GR++S +E+VA+NDT + +HLLKYDS LG + + I+V+GK I+ VS+RNP NLPW +W Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEW 90 HSP 2 Score: 28.4906 bits (62), Expect = 9.904e-25 Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREG 567 P P IDL+IE TGVF +EG Sbjct: 82 PENLPWKEWEIDLIIESTGVFTSKEG 107
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.954e-23 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGD 514 +KV INGFGRIGR+F R GR++ +E+VAIND K +HLLKYDS GIF+ V+ D I VDGK I+V + ++P +PWGD Sbjct: 3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVE-AKDDSIVVDGKEIKVFAQKDPSQIPWGD 87 HSP 2 Score: 39.2762 bits (90), Expect = 3.954e-23 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREGGS 573 P Q P G LG+D+VIE TGVF DRE S Sbjct: 80 PSQIPWGDLGVDVVIEATGVFRDRENAS 107
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.843e-20 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGD 514 ++V INGFGRIGRN+ R + + +E+VA+ND G +HLLKYD+ LG +A+V D I+VDGK I+V+S RNP ++PWG+ Sbjct: 3 IRVGINGFGRIGRNYFRALL-EQGADIEIVAVNDLGDTATTAHLLKYDTILGRLKAEVSHT-EDTITVDGKTIKVLSERNPADIPWGE 88 HSP 2 Score: 30.8018 bits (68), Expect = 2.843e-20 Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDR 561 P P G LG+D+VIE TG+F + Sbjct: 81 PADIPWGELGVDIVIESTGIFTKK 104
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.658e-19 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGD 514 +KVAING+GRIGRN LR + G K LE+VAIND G +HL +YD+ G F +V V D V+G I+V++ RNP LPWG+ Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAINDLGNAATNAHLTQYDTVHGRFPGEVS-VDGDAFRVNGDRIRVLAQRNPAELPWGE 90 HSP 2 Score: 31.187 bits (69), Expect = 6.658e-19 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREGGS 573 P + P G LG+D+V+E TG+F +E S Sbjct: 83 PAELPWGELGVDVVMECTGLFTSKEKAS 110
BLAST of CX294957 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.126e-18 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 251 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGD 514 +KVAING+GRIGRN LR + G K +E+VAIND G +HL +YD+ G F +V V D V+G I+V++ RNP LPWG+ Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAINDLGNAATNAHLTQYDTVHGRFPGEVS-VDGDAFRVNGDRIRVLAQRNPAELPWGE 90 HSP 2 Score: 31.187 bits (69), Expect = 1.126e-18 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 490 PRQSPLGGLGIDLVIEGTGVFVDREGGS 573 P + P G LG+D+V+E TG+F +E S Sbjct: 83 PAELPWGELGVDVVMECTGLFTSKEKAS 110 The following BLAST results are available for this feature:
BLAST of CX294957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294957 ID=CX294957; Name=CX294957; organism=Citrus clementina; type=EST; length=587bpback to top |