CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: PMT2_TOBAC (Putrescine N-methyltransferase 2 OS=Nicotiana tabacum GN=PMT2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 56/120 (46.67%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 162 GWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 GWFSE + +WPGEA SLKV+++LF+GKS+YQ+V++FES YGKVL LDG +Q TE Y EMI HLPL SIP+PK E+ R+ ++E IDI E Sbjct: 65 GWFSEFSA--------------LWPGEAFSLKVEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLPLGSIPNPKKVLIIGGGIGFTLFEMLRYPTIEKIDIVE 170
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_NEUCR (Spermidine synthase OS=Neurospora crassa GN=spe-3 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.191e-21 Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 144 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 H T+ GWF E + MWPG+A +LKV+++L KS YQ+VL+F+S +G VLVLD ++Q TE+DE +YQEMI HL + S P+PK RE+ +HD VE +C+ Sbjct: 6 HPTIQDGWFREISN--------------MWPGQAMTLKVEKVLHHEKSLYQDVLIFKSTDHGNVLVLDNVIQCTERDEFSYQEMITHLAMNSHPNPKKVLVIGGGDGGVLREVVKHDCVEEAILCD 117
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPSY_YEAST (Spermine synthase OS=Saccharomyces cerevisiae GN=SPE4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.268e-18 Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 144 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 H + GWF E N+ +PG+A ++ V IL++ +SE+Q++L+F + YG VLVLDGIVQ TE DE AYQEMI H+ + + +PK RE+++H VE I + E Sbjct: 7 HPYIKDGWFRE-------------INDKSFPGQAFTMTVDSILYEARSEFQDILIFRNKVYGTVLVLDGIVQCTEFDEFAYQEMITHIAMFAHSNPKRVLIIGGGDGGVLREVAKHSCVEDITMVE 119
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_METJA (Probable spermidine synthase OS=Methanocaldococcus jannaschii GN=speE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 132 DAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 D KCH WF+E Y NN + A S++VK+IL++ KS +QE+ + ++ +GK L+LD Q TE+DE Y E+I+H+PL + P+P+ RE+ +H SVE +D E Sbjct: 6 DFKCHI-----WFTE------------YHNNNV----ALSVRVKDILYREKSGFQEIEIIDTYDFGKALILDNTFQTTERDEFIYHELISHIPLFTHPNPRNVLVIGGGDGGTVREVVKHKSVETVDFVE 114
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE2_LEPIN (Spermidine synthase 2 OS=Leptospira interrogans GN=speE2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 237 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 G A +KVKE L + +Q++ VFES+ +G++ LDG+V +TE DE AY EMI H+P+ S P+P+ RE+ +H SV+ + +CE Sbjct: 15 GRALKIKVKEFLHSRTTPFQKIDVFESVGFGRMFTLDGVVMMTEADEFAYHEMIVHVPMMSHPNPEKVLVIGGGDGGTVREVLKHPSVKEVHLCE 109
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK5 (Spermidine synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=speE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 243 AHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 A + K+KE L K++YQE+ + ++ A G++LVLDGIVQ T KDE Y EMI H+PL + P+P+ RE+ +H++VE + +CE Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK1 (Spermidine synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=speE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 243 AHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 A + K+KE L K++YQE+ + ++ A G++LVLDGIVQ T KDE Y EMI H+PL + P+P+ RE+ +H++VE + +CE Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTE (Spermidine synthase OS=Clostridium tetani GN=speE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.003e-15 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 3 Query: 255 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 K+KE L + K+EYQ++ + ++ A G++LVLDGIVQ + KDE Y EMI H+PL + P+PK REI +H SVE +CE Sbjct: 18 KIKETLVRKKTEYQDLAIVDTYALGRMLVLDGIVQTSIKDEYVYHEMITHIPLYTHPNPKKVLVVGGGDGGTIREILKHPSVEKAVLCE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE1_AQUAE (Spermidine synthase 1 OS=Aquifex aeolicus GN=speE1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.828e-15 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 246 HSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVE---LIDI 515 H V +IL++GKS YQE+ V ES +G++L+LDG+VQL EK E Y E +AH+PL + P+P+ RE+ +HD VE L+DI Sbjct: 17 HCYTVSKILYQGKSPYQEIQVIESPEFGRMLILDGVVQLDEKYEFLYHEYLAHVPLHAHPNPRNVLIIGGGDGGTLREVLKHDIVERAVLVDI 109
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE1_THETN (Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis GN=speE1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 249 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+KVKE L K+ YQ + + +S +G+VLVLDGI+Q TEKDE Y EMI H+PL + +PK RE+ +H SVE + + E Sbjct: 16 SIKVKETLVVEKTPYQHLAILDSYQFGRVLVLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKDVLIIGGGDGGSVREVLKHSSVERVVLAE 106 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |