CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBP (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 237 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 G A S +V + + +S +Q++ +FE+ ++G++ LDG+ +T KDE +Y EMIAH+P+ S P+P++ RE+ +H SV+ + +CE Sbjct: 14 GRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBA (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 237 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 G A S +V + + +S +Q++ +FE+ ++G++ LDG+ +T KDE +Y EMIAH+P+ S P+P++ RE+ +H SV+ + +CE Sbjct: 14 GRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_HYDS0 (Spermidine synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 246 HSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVE---LIDI 515 H + +IL++GKS+YQE+ V ES +GK+L+LDG+VQ TEK+E Y EM+ H + + +P+ RE+ +H SV+ L+DI Sbjct: 17 HCYGISKILYEGKSKYQEIQVVESHYFGKILILDGVVQFTEKNEFFYHEMLTHPVMFAHKNPQNVLIIGGGDGGILREVLKHKSVKKAVLVDI 109
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ERWCT (Spermidine synthase OS=Erwinia carotovora subsp. atroseptica GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V +L+ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL S + K RE+SRH VE I + E Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERE8 (Spermidine synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_PECCP (Spermidine synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V +L+ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL S + K RE+SRH VE I + E Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEHITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ESCF3 (Spermidine synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKDVLIIGGGDGAMLREVTRHKNVESITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOD6 (Spermidine synthase OS=Clostridium difficile (strain 630) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 249 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+KV + LF+GKS++Q + VF+S +GK L +DG++ +T KDE Y EMI H+P+ + + K RE+SR+ +E ID+ E Sbjct: 16 SIKVNKHLFEGKSQFQRIDVFDSDEFGKFLTIDGLMMVTYKDEFIYHEMITHVPMATNLNIKKVLVIGGGDGGTVRELSRYPQIEKIDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CITK8 (Spermidine synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=speE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPY (Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=speE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.424e-12 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |