CX294968

Overview
NameCX294968
Unique NameCX294968
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: TINAG_HUMAN (Tubulointerstitial nephritis antigen OS=Homo sapiens GN=TINAG PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 69/243 (28.40%), Postives = 104/243 (42.80%), Query Frame = 2
Query:   32 ILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQ-FKHLLGVKPTPKGLLLGVPVKTHD--KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPIS-AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPA---------YPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            +++  +I++VN+    GW A    QF   T+   FK  LG  P P  +LL +   T     +  LP+ F A   WP  +     LDQ +C + WAF      +DR  I      + +++                   I  AW Y    G+V+  C P F     ++ GC  A         + T  C     K N++++ S       YR++S+  +IM EI +NGPV+    V EDF HYK
Sbjct:  155 LVRPELIEQVNKGDY-GWTAQNYSQFWGMTLEDGFKFRLGTLP-PSPMLLSMNEMTASLPATTDLPEFFVASYKWPGWT--HGPLDQKNCAASWAFSTASVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGSIDRAWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSP-----PYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYK 388          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 65/219 (29.68%), Postives = 90/219 (41.10%), Query Frame = 2
Query:   68 NPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPY-FDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            NP+  WKA    +F   T  +   LL      K     VP  T   + + P SFD R  +P C  I  ++DQG CGSCWAF +V ++ DR C       ++  +                 +  S WR+    G  T+EC PY   STG              C  KC   + L    K  +  A     D   IM  +   GP++ +FTVY DF +Y+
Sbjct:   28 NPR--WKAGIPKRFEGLTKDEISSLLMPVSFLKRDRAAVPRGTVSAT-QAPDSFDFREEYPHC--IPEVVDQGGCGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRGDMACDGGWLPSVWRFLTKTGTTTDECVPYQSGSTGA----------RGTCPTKCADGSDLPHLYK--ATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYE 229          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: TINAL_MOUSE (Tubulointerstitial nephritis antigen-like OS=Mus musculus GN=Tinagl1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 64/246 (26.02%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   32 ILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQ-FKHLLG-VKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPI-SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV----------RKCVKK---NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            ++   +IK +N     GW+A  +  F   T+ +  ++ LG ++P+   + +        +   LP +F+A   WP  + I   LDQG+C   WAF      SDR  IH   +++  ++                   +  AW +    GVV++ C P+      S      A PTP+C+          R+   +    Q+  N  +    AYR+ SD ++IM E+ +NGPV+    V+EDF  Y+
Sbjct:  140 LVDPDMIKAINRG-NYGWQAGNHSAFWGMTLDEGIRYRLGTIRPSSTVMNMNEIYTVLGQGEVLPTAFEASEKWP--NLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQQGCRGGRLDGAWWFLRRRGVVSDNCYPF------SGREQNEASPTPRCMMHSRAMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALMEVHEDFFLYQ 376          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15
Identity = 62/246 (25.20%), Postives = 109/246 (44.31%), Query Frame = 2
Query:   32 ILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQ-FKHLLG-VKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPI-SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV----------RKCVKK---NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            ++  ++IK +N     GW+A  +  F   T+ +  ++ LG ++P+   + +        +   LP +F+A   WP  + I   LDQG+C   WAF      SDR  IH   +++  ++                   +  AW +    GVV++ C P+           + A PTP+C+          R+   +   +Q+  N  +     YR+ SD ++IM E+ +NGPV+    V+EDF  Y+
Sbjct:  140 LVDPAMIKAINRG-NYGWQAGNHSAFWGMTLDEGIRYRLGTIRPSSSVMNMNEIYTVLGQGEVLPTAFEASEKWP--NLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQKGCRGGRLDGAWWFLRRRGVVSDNCYPF-----SGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALMEVHEDFFLYQ 377          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 60/219 (27.40%), Postives = 89/219 (40.64%), Query Frame = 2
Query:   68 NPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNS-KHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            NP+  WKA    +F   T  +   LL      K      P  T      +P+SFD R  +P C  I  ++DQG CGSCWAF +V    DR C+       +  +                 +  + W++    G  T+EC PY   +      C    PT KC     K +     S K Y +       D   +M  +  +GP++V+F V+ DF +Y+
Sbjct:   28 NPR--WKAGIPKRFEGLTKDEISSLLMPVSFLKNAKGAAPRGTFTDKDDVPESFDFREEYPHC--IPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVKYSPQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTTDECVPYKSGSTTLRGTC----PT-KCADGSSKVHLATATSYKDYGL-------DIPAMMKALSTSGPLQVAFLVHSDFMYYE 230          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14
Identity = 62/245 (25.31%), Postives = 106/245 (43.27%), Query Frame = 2
Query:   32 ILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQ-FKHLLG-VKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPI-SAWRYFVHHGVVTEECDPYF----DSTGCSHP--------GCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            ++   +IK +N+    GW+A  +  F   T+ +  ++ LG ++P+   + +       +    LP +F+A   WP  + I   LDQG+C   WAF      SDR  IH   +++  ++                   +  AW +    GVV++ C P+     D  G + P        G      T  C    V  N +++ +       YR+ S+ ++IM E+ +NGPV+    V+EDF  YK
Sbjct:  141 LVDPDMIKAINQG-NYGWQAGNHSAFWGMTLDEGIRYRLGTIRPSSSVMNMHEIYTVLNPGEVLPTAFEASEKWP--NLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQNLLSCDTHQQQGCRGGRLDGAWWFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNNNDIYQVT-----PVYRLGSNDKEIMKELMENGPVQALMEVHEDFFLYK 377          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  443 AWRYFVHHGVVTEE-------CDPYFDSTGCSHPGCEPAY-------PTPKCVRKCVKKN-QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            AW+YF   GVVT         C PY +   C   G EP Y        TPKC + C +   + ++  KH+  SAYR+ ++ + I  +I KNGPV   F VYEDFAHYK
Sbjct:    1 AWQYFALEGVVTGGNYRKQGCCRPY-EFPPCGRHGKEPYYGECYDTAKTPKCQKTCQRGYLKAYKEDKHFGKSAYRLPNNVKAIQRDIMKNGPVVAGFIVYEDFAHYK 107          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11
Identity = 55/178 (30.90%), Postives = 78/178 (43.82%), Query Frame = 2
Query:  203 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGC---EPAYPTPKCVRKCVKKNQLWRNSKHYSISA-YRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHY 718
            K  +LP+ FDAR  W     I  + DQG CGS W+       SDR  I     +N +LS +                 Y   AW Y    GVV + C PY          C   +  Y   + +R C   +Q   +S  + ++  Y+++S  EDI  E+  NGPV+ +F V+EDF  Y
Sbjct:  180 KPRELPEHFDARDKWGPL--IHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLS-SQQLLSCNQHRQKGCEGGYLDRAWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLR-CPSGSQ---DSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMY 350          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11
Identity = 58/222 (26.13%), Postives = 88/222 (39.64%), Query Frame = 2
Query:   83 WKAARNPQFSNYTVGQFKHLLGVKP----TPKGLLLGVPVKTHDKSLK-LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMN---LSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY-RINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            WKA    +F N T  +F+ +L ++P       G L  + +    + +  +P  FD R  +PQC  +   LDQG CGSCWAF A+    DR C   G++   +S S                    P   W +    G  T EC  Y D     H    P      C   C   + +    + Y    Y +++     IM  +   GP++    VY D ++Y+
Sbjct:   31 WKAGMPKRFENVTEDEFRSML-IRPDRLRARSGSLPPISITEVQELVDPIPPQFDFRDEYPQC--VKPALDQGSCGSCWAFSAIGVFGDRRCA-MGIDKEAVSYSQQHLISCSLENFGCDGGDFQP--TWSFLTFTGATTAECVKYVD---YGHTVASP------CPAVCDDGSPI----QLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYADLSYYE 233          
The following BLAST results are available for this feature:
BLAST of CX294968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
TINAG_HUMAN3.134e-1628.40Tubulointerstitial nephritis antigen OS=Homo sapie... [more]
CATB3_GIALA9.118e-1629.68Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
TINAL_MOUSE4.525e-1526.02Tubulointerstitial nephritis antigen-like OS=Mus m... [more]
TINAL_RAT7.719e-1525.20Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATB2_GIALA2.933e-1427.40Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
TINAL_HUMAN3.831e-1425.31Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
CYSP3_OSTOS5.532e-1340.74Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
YCF2E_CAEEL5.178e-1130.90Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
CATB1_GIALA5.178e-1126.13Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05065B07SK DroRLeaf1 Citrus clementina cDNA clone C05065B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294968 ID=CX294968; Name=CX294968; organism=Citrus clementina; type=EST; length=721bp
GAGGGTTTCCTAGCTCAAGCTTGATTCTCATATTCTCCAGGATTCAATCA
TCAAAGAAGTGAATGAGAACCCTAAGGCTGGATGGAAAGCTGCCAGAAAT
CCTCAATTTTCCAATTACACTGTTGGGCAATTTAAGCACCTTCTTGGAGT
CAAGCCAACACCTAAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTCATG
ACAAATCCTTGAAGTTGCCTAAAAGCTTTGATGCAAGGTCCGCTTGGCCA
CAATGCAGCACCATTAGTAGGATCCTAGATCAGGGCCATTGTGGTTCTTG
TTGGGCTTTTGGTGCTGTTGAAGCGCTATCTGATCGTTTCTGCATCCATT
TTGGCATGAACCTATCTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGC
TTTTTGTGTGGAGATGGTTGTGACGGGGGTTATCCAATTTCTGCATGGCG
ATACTTTGTCCACCATGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTG
ATAGTACTGGCTGTTCCCACCCTGGTTGTGAGCCGGCATATCCTACTCCA
AAGTGTGTGAGGAAGTGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAA
GCACTACAGTATTAGTGCATATAGAATCAATTCTGATCCAGAGGACATAA
TGGCAGAAATTTACAAGAATGGACCAGTTGAAGTTTCCTTCACAGTTTAT
GAAGATTTTGCTCACTACAAA
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