CX294975

Overview
NameCX294975
Unique NameCX294975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294975 vs. ExPASy Swiss-Prot
Match: ILVH_BUCAI (Acetolactate synthase small subunit OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ilvH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 3 
Query:  285 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKL 548
            R  +S+ + +ESG ++R+ G+F++RGYNIE++ +    D  L   TI   G E+ + Q+ +QL+KL++V++V  I    H+ERE++L+K+
Sbjct:    2 RRILSILLENESGALSRVIGLFSQRGYNIETITLAPTEDPTLSKMTIQTVGNEKAIEQIEKQLHKLIDVLRVVQIGQSSHIEREIVLLKV 91
The following BLAST results are available for this feature:
BLAST of CX294975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ILVH_BUCAI3.102e-1337.78Acetolactate synthase small subunit OS=Buchnera ap... [more]

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Properties
Property NameValue
Genbank descriptionC05065C02SK DroRLeaf1 Citrus clementina cDNA clone C05065C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294975 ID=CX294975; Name=CX294975; organism=Citrus clementina; type=EST; length=703bp
GAGGGTTGTTATGCTGCTGTCTGCTGTGAACTTCTCTCTGGCTAATAATA
ATGGCGGCTACTATGACGCCCTACCCGAAACTGAATTTGAGTCACTGTTT
TATCACCAAAAGCTGTGATTTTGTGCTGTTTTGGAGGCCACCATCGCAAG
GGAGGACTAGTTTCAGCAGTTCTGCTGAAGTCTCTTCAAAGAAACTCCAA
TTGGTCACTGCTAGCGGCAGCAGTTCTAACAATGCTCTCCCTGTTACTCA
GTCCGTGCCTCCTATCACTGCTTCCAAGGTGAAACGCCACACAATTTCAG
TGTTTGTTGGTGACGAGAGTGGAATAATAAACAGAATTGCTGGTGTTTTC
GCTAGGCGTGGTTACAACATTGAGTCCCTTGCTGTCGGTTTGAATGTGGA
CAAGGCTCTCTTTACCATAGTTGTGTCTGGAACTGAAAGGGTTTTGCGAC
AAGTTGTGGAACAACTTAACAAGCTTGTGAACGTCATAAAGGTAGAAGAC
ATCTCAAATGAGCCACATGTAGAGCGTGAACTGATGCTTATAAAACTTAA
TGGTGATACTAGTACCTGGCCTGAGGTAACAATTCTATATGCTTCTTTAT
GCATTCTTCATAAGAATAATTTAAATCACAAAATCAATCTTCTGGCAGAT
TCTATTCTGCAAAGGATTCTTCCGCCCTGAAAAGGAAGCTGTTCTAGTAA
TTG
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