CX294978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: SUFC_ECOLI (Probable ATP-dependent transporter sufC OS=Escherichia coli (strain K12) GN=sufC PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.325e-46 Identity = 98/175 (56.00%), Postives = 125/175 (71.43%), Query Frame = 1 Query: 181 IAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 ++ + IL+G++L V+ GEVHAIMG NGSGKSTLS L G DYEVT G+V FKG++LL + PE+R+ G+FM+FQ PVEIPGV+N FL A NA R GQ L +F + K+ L M D L R+VN GFSGGE+KRN+ILQ+AVL +L ILDE DSGLD+DAL++ Sbjct: 9 VSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKV 183
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: V296_BACSU (Vegetative protein 296 OS=Bacillus subtilis GN=yurY PE=1 SV=3) HSP 1 Score: 182.185 bits (461), Expect = 2.499e-45 Identity = 93/170 (54.71%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 196 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +EILKGVNL + GE HA+MG NG+GKSTLS ++GHP YEVT+GS+ G+++LEME +ER+ AGLF++ Q P EI GV N DFL A NARR + E+ ++F + +E L M + R +NEGFSGGE+KRNEILQL ++ +AILDEIDSGLD+DAL++ Sbjct: 18 KEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREE--GDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKV 185
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y285_STRP1 (Probable ABC transporter ATP-binding protein SPy_0285/M5005_Spy0242 OS=Streptococcus pyogenes serotype M1 GN=SPy_0285 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 88/170 (51.76%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 196 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +ER+ GLF++ Q P EIPG+ N +F+ A NA K + ++ +F L K+ L MK + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL++ Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERARLGLFLAMQYPSEIPGITNAEFMRAAMNA--GKADEDKISVRDFITKLDEKMALLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKV 183
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y273_STRP8 (Probable ABC transporter ATP-binding protein spyM18_0273 OS=Streptococcus pyogenes serotype M18 GN=spyM18_0273 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 88/170 (51.76%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 196 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +ER+ GLF++ Q P EIPG+ N +F+ A NA K + ++ +F L K+ L MK + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL++ Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERARLGLFLAMQYPSEIPGITNAEFMRAAMNA--DKADEDKISVRDFITKLDEKMALLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKV 183
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y273_STRP6 (Probable ABC transporter ATP-binding protein M6_Spy0273 OS=Streptococcus pyogenes serotype M6 GN=M6_Spy0273 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 88/170 (51.76%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 196 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +ER+ GLF++ Q P EIPG+ N +F+ A NA K + ++ +F L K+ L MK + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL++ Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERARLGLFLAMQYPSEIPGITNAEFMRAAMNA--GKADEDKISVRDFITKLDEKMALLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKV 183
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y208_STRP3 (Probable ABC transporter ATP-binding protein SpyM3_0208/SPs0214 OS=Streptococcus pyogenes serotype M3 GN=SpyM3_0208 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 88/170 (51.76%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 196 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +ER+ GLF++ Q P EIPG+ N +F+ A NA K + ++ +F L K+ L MK + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL++ Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERARLGLFLAMQYPSEIPGITNAEFMRAAMNA--GKADEDKISVRDFITKLDEKMALLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKV 183
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y035_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0035 OS=Methanocaldococcus jannaschii GN=MJ0035 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 66/170 (38.82%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 181 IAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDV 690 + +EILKGVNL V E E+HAI+G NG+GKSTL+ ++G Y+ T+G ++FKG ++++ ER+ G+ +++Q P G+ ++L + N + +K E+ + L KL L +L+R V+E SGGERKR E+ + + DLAILDE DSG+D+ Sbjct: 14 VYRGNREILKGVNLTVEENEIHAIIGPNGAGKSTLAYTIMGISGYKPTKGRIIFKGVDIIDKNITERARMGMTLAWQEPARFEGIKVKNYLMLGMNEKYKK--DKEIAEEKIREAL--KLVNLD-PDKYLDRYVDETLSGGERKRIELASIICMEPDLAILDEPDSGIDI 178
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: YKFD_BACSU (Putative oligopeptide transport ATP-binding protein ykfD OS=Bacillus subtilis GN=ykfD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 148 PLLQVTGLTAVIAESKQEILK---GVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAG--LFMSFQSPVEI--PGVNNIDF------LHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDV 690 PLL+V+ L K+ +K GV + EGE ++G++G GKSTL +VL+ Y+ TEGSV ++G NL + +E+ L M FQ P P + + +H YN + +L + LE + + DF +R +E FSGG+R+R I + L + + DE S LDV Sbjct: 5 PLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRL--YQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIHNLYNTHKARL-----------LVVDELLEAVGLHPDFGSRYPHE-FSGGQRQRIGIARALSLNPEFIVADEPISALDV 184
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: RBSA_BACHD (Ribose import ATP-binding protein rbsA OS=Bacillus halodurans GN=rbsA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 56/186 (30.11%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 151 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGL---DVDAL 699 ++++TG+ S +LK V+ + +GE+HA+MG+NG+GKSTL K+L G YE G+V KG + P+E GL + Q +P + + L + K G + E KL L +K R N S G+++ EI + + AD+ I+DE + L ++D L Sbjct: 2 IVEMTGIHKSF--SGNPVLKDVSFTLEKGEIHALMGENGAGKSTLMKILTG--IYERDSGTVKIKGREVHYKHPKEAEADGLAVIHQELNILPELTVAENLFVGKERTYGKTGW--IKSKEMNRLAEEKLAELGLKVKGTERAGN--LSVGKQQLIEIAKALMTNADIIIMDEPTAALTDREIDTL 179 The following BLAST results are available for this feature:
BLAST of CX294978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294978 ID=CX294978; Name=CX294978; organism=Citrus clementina; type=EST; length=728bpback to top |