CX294980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.703e-49 Identity = 94/188 (50.00%), Postives = 133/188 (70.74%), Query Frame = 2 Query: 11 RIAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 ++ +P KG+LL+GPPG GKT++AKA A +G FIN+ S++T KW+GE +K AVFSLA KI P +IF+DE+DS L R + +HEA MK +FM WDGL T + +++V+ ATNRP D+D A++RR+P V LP+A R +IL++IL+ E+LS ++ IA+ ++GYSGSDLK LC AA Sbjct: 124 KLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSM-DHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAA 310
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.754e-49 Identity = 100/190 (52.63%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +L+ +L K+ SP + +A MTDGYSGSDL L AA PI Sbjct: 339 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQG-SPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 526
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 193.741 bits (491), Expect = 8.754e-49 Identity = 100/190 (52.63%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +L+ +L K+ SP + +A MTDGYSGSDL L AA PI Sbjct: 372 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQG-SPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 559
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.754e-49 Identity = 100/190 (52.63%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +L+ +L K+ SP + +A MTDGYSGSDL L AA PI Sbjct: 374 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQG-SPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 561
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.754e-49 Identity = 100/190 (52.63%), Postives = 140/190 (73.68%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +RILV+ ATNRP +LD+AV+RR +R+ V+LP+ R +L+ +L+K+ SP + +A MTDGYSGSDL L AA PI Sbjct: 371 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQG-SPLTQKELAQLARMTDGYSGSDLTALVKDAALGPI 558
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 193.741 bits (491), Expect = 8.754e-49 Identity = 101/191 (52.88%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F +IS +++TSK+ G+GEK V+A+F++A ++ PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL + +RI+V+AATNRP +LDEA +RR P+R+ V LPD R +L+ +L K+ SP D D +A +T+GYSGSDL L AA PI Sbjct: 535 PAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSS-NEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALRRFPKRVYVTLPDRDTRELLLRRLLQKQG-SPLSDADLAHLAQLTEGYSGSDLTALARDAALEPI 723
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 99/190 (52.11%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +L+ +L K+ SP + +A +TDGYSGSDL L AA PI Sbjct: 371 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL-RERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQG-SPLTQKELAQLARLTDGYSGSDLTALAKDAALGPI 558
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A +TDGYSGSDL L AA PI Sbjct: 515 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPI 703
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A +TDGYSGSDL L AA PI Sbjct: 515 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPI 703
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A +TDGYSGSDL L AA PI Sbjct: 515 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPI 703 The following BLAST results are available for this feature:
BLAST of CX294980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 391
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294980 ID=CX294980; Name=CX294980; organism=Citrus clementina; type=EST; length=750bpback to top |