CX294980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D D +A +T+GYSGSDL L AA PI Sbjct: 539 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPI 727
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A +TDGYSGSDL L AA PI Sbjct: 515 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPI 703
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.950e-48 Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A TDGYSGSDL L AA PI Sbjct: 527 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPI 715
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.950e-48 Identity = 99/190 (52.11%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSP--DVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +L+ +L K+ SP + +A MT+GYSGSDL L AA PI Sbjct: 372 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQG-SPLTQKELAQLARMTNGYSGSDLTALAKDAALGPI 559
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.327e-48 Identity = 101/190 (53.16%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVD-FDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL D +RI+VLAATNRP +LDEA +RR +R+ V+LPD R +L +L K+ D + +A +T+GYSGSDL L AA PI Sbjct: 534 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPI 722
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.327e-48 Identity = 93/192 (48.44%), Postives = 136/192 (70.83%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKTMLAKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ IF+DE+DS+ RR EHEA R++K+E ++ DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A RA++L++ L + +L PDV + IA+ T+GYSG+D+ N+C A+ Sbjct: 235 IRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDAS 426
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.345e-48 Identity = 101/190 (53.16%), Postives = 137/190 (72.11%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDA-IANMTDGYSGSDLKNLCVTAAHRPI 586 P KG+LLFGPPG GKT+LA+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS+IF+DEVDS+L R + EHEA R++K EF+V +DGL + +RI+VLAATNRP +LDEA +RR +R+ V+LP+ R +L +L K+ D + A +A +TDGYSGSDL L AA PI Sbjct: 522 PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPI 710
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.345e-48 Identity = 98/189 (51.85%), Postives = 135/189 (71.43%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P KGILLFGPPGTGKT++ K +A ++GA F +IS SS+TSKW GEGEK V+A+F++A P+VIF+DE+DS+L +R GEHE+ R++K EF+V DG T +RILV+ ATNRP ++DEA RRL +RL + LP+A R +I+ ++AKE S + + +AI DG+SG+D+ LC AA PI Sbjct: 415 PPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR-GEGEHESSRRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGADMTQLCREAALGPI 602
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.674e-48 Identity = 92/192 (47.92%), Postives = 135/192 (70.31%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKTMLAKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ IF+DE+DS+ RR EHEA R++K+E ++ DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A RA++L++ L + +L PD+ + IA T+GYSG+D+ N+C A+ Sbjct: 235 IRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDAS 426
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.679e-48 Identity = 97/200 (48.50%), Postives = 144/200 (72.00%), Query Frame = 2 Query: 2 IRPRI----AKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKE-DLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 IRP + P +G+LLFGPPG GKTMLAKAVA E+ A F NIS +S+TSK+ GEGEK V+A+FS+A ++ PS+IF+DEVDS+L R GEH+A R++K EF++ +DG+++ +R+LV+ ATNRP +LD+AV+RR +R+ V+LP+ R +L+ +L+K+ + + + ++ +T+GYSGSD+ L AA PI Sbjct: 350 IRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPI 548 The following BLAST results are available for this feature:
BLAST of CX294980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 391
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294980 ID=CX294980; Name=CX294980; organism=Citrus clementina; type=EST; length=750bpback to top |