CX294980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.183e-45 Identity = 95/194 (48.97%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDV---DFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 + +P KGILLFGPPG GKT+LAKAVA E+ F NIS SS+TSKW G+ EK ++ +F +A PS+IF+DE+DS+L R + E R+MK EF+V +DG + +RILV+ ATNRP +LD+AV+RR P+R+M+NLPD R +++ L K ++ + D IA+ T G+S SDL LC AA PI Sbjct: 268 LRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCERSEK-DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPI 460
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.545e-45 Identity = 91/191 (47.64%), Postives = 131/191 (68.59%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F N+S S++TSK+ GE EK V+ +F +A AP+ IF+DE+DS+ RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R +L++ L + DL+ DV+ D IA +GYSG+D+ N+C A+ Sbjct: 233 IRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDAS 423
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.018e-45 Identity = 91/192 (47.40%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F N+S S++TSK+ GE EK V+ +F +A AP+ IF+DE+DSM RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R ++L++ L + +L+ DVD IA ++GYSG+D+ N+C A+ Sbjct: 233 IRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDAS 424
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.636e-45 Identity = 85/188 (45.21%), Postives = 135/188 (71.81%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 + P K ++L GPPGTGKT++A+A+A+E+ + F +S + ++SKW G+ EK V+ +F LA APS+IF+DE+D++ G+R N GEHEA R++K+EF+V DG + K D+ R+ VLAATN P++LDEA+ RR +R+ + LPD R K+++ + S ++++D +A T+G+SG+D+ +LC TAA Sbjct: 222 LRSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAA 409
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.496e-45 Identity = 91/192 (47.40%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F NIS S++TSK+ GE EK V+ +F +A AP+ IF+DE+DS+ RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R ++L++ L + +L+ DV+ + IA DGYSG+D+ N+C A+ Sbjct: 239 IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS 430
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.496e-45 Identity = 91/192 (47.40%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F NIS S++TSK+ GE EK V+ +F +A AP+ IF+DE+DS+ RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R ++L++ L + +L+ DV+ + IA DGYSG+D+ N+C A+ Sbjct: 235 IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS 426
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.872e-45 Identity = 107/239 (44.77%), Postives = 144/239 (60.25%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVIL--AKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPIXXXXXXXXXXXXXXXXXXXXXXXLSGCADIRPLNMDDF 700 + +P +G+LLFGPPGTGKTMLA+AVATE+ + F +IS SS+TSK+ GE EK V+A+F+LA K++PS+IFVDE+DS+L R + G EHE R++K EF++ W L +T D R+LVLAATN P+ +D+A RR RR + LPD R L +L K LS + D +AI T+ YSGSDL L AA P+ + IRP+N+DDF Sbjct: 488 LREPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE-DIEAIVKATEYYSGSDLTALAKDAAMGPL---------------RSLGESLLFTKMESIRPINLDDF 710
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.308e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLC 562 + P +GILL+GPPG GKT+LAKAVA AG FIN+ +S++T KW+GE +K AVFS+A K P++IF+DE+DS L R++ +HE+ MK +FM WDG + ++I+V+ ATNRP D+D A++RR+ R V +P+A R++IL VIL E ++ V+ IA +G SGSDLK +C Sbjct: 113 LLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQS-HDHESTAMMKAQFMTLWDGF-SSSGDQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.709e-44 Identity = 89/192 (46.35%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F N+S S++TSK+ GE EK V+ +F +A +P+ IF+DE+DS+ RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R ++L++ L + +L+ DVD +IA +GYSG+D+ N+C A+ Sbjct: 238 IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.709e-44 Identity = 89/192 (46.35%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 I +P KG+L+ GPPGTGKT+LAKAVATE F N+S S++TSK+ GE EK V+ +F +A +P+ IF+DE+DS+ RR EHEA R++K E +V DG+ ++ ++VLAATN P+D+DEA+ RRL +R+ + LP A R ++L++ L + +L+ DVD +IA +GYSG+D+ N+C A+ Sbjct: 238 IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429 The following BLAST results are available for this feature:
BLAST of CX294980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 391
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294980 ID=CX294980; Name=CX294980; organism=Citrus clementina; type=EST; length=750bpback to top |