CX294980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.497e-40 Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 14 IAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKE------DLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 I P KG+LL+GPPGTGKT+LAKAVATE F NIS S+I SKW G+ EK V+ +F LA APS IF+DE++S++ +R GEHE +MK E +V DGL + + + VLAA+N P++LD A++RRL +R++V+LP R ++ L +L +++ ++ T+GYSGSD+K +C AA RP+ Sbjct: 284 ILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGL-ARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPV 481
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.355e-40 Identity = 89/190 (46.84%), Postives = 128/190 (67.37%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQV-ILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 KP KGILL+GPPGTGK+ LAKAVATE + F +IS S I +KW G+ EK VK +F +A + SVIF+DEVDS+ R N E E+ R++K EF++ +G+ D++ ILVLAATN P+ LD A+ RR +R+ + LP+ RAK+ Q+ I + + D+ +A++T+GYSGSD+ +L A +P+ Sbjct: 166 KPWKGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSR-NDQESESARRIKTEFLIQMNGV-GNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPV 353
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40 Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQV-------ILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 KP GILL+GPPGTGK+ LAKAVATEA + F ++S S + SKW GE EK VK +F++A + PS+IF+DEVD++ G R GE EA R++K E +V +G+ D++ +LVL ATN P+ LD A+ RR RR+ + LPD R + ++ +L KE D+ + MT+GYSGSD+ + A +PI Sbjct: 164 KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTR-GEGESEASRRIKTELLVQMNGV-GNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE------DYRTLGAMTEGYSGSDIAVVVKDALMQPI 351
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39 Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAG-ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +GILLFGPPGTGK+ LAKAVATEA + F +IS S + SKW GE EK VK +F LA + PS+IF+DE+DS+ G R + E EA R++K EF+V G+ D + ILVL ATN P+ LD A+ RR +R+ + LP+A RA + ++ L S + DF + TDGYSG+D+ + A +P+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMQGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPV 353
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.830e-38 Identity = 80/183 (43.72%), Postives = 123/183 (67.21%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLC 562 KP +GILLFGPPGTGKT+LAKAVA E+ ANFI++ + SKW GE EK+V+ +F A ++AP VIF DE+DS+ RR G+ ++ ++ + DGL ++ + ++V+AATNRP +D A++R RL R + + PD R +I ++ L + L+ DV+ + +A T+GYSG+D++ +C Sbjct: 487 KPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGL--EELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVC 667 HSP 2 Score: 149.828 bits (377), Expect = 1.450e-35 Identity = 82/188 (43.62%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRREN-PGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 +P KG+LL+GPPGTGKT++AKAVA E A+FI IS I SK++GE E+ ++ +F A + APS+IF+DE+DS+ +RE GE E R++ + + DGL + ++V+AATNRP +D A+ R R R + + +PD R +IL++ K L+ DVD + +A +T+G+ G+DL+ LC AA Sbjct: 214 EPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVE--RRVVAQLLALMDGLEARGD--VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAA 397
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 89/190 (46.84%), Postives = 122/190 (64.21%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAG-ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +GILLFGPPGTGK+ LAKAVATEA + F +IS S + SKW GE EK VK +F LA + PS+IF+DE+DS+ G R + E EA R++K EF+V G+ D + ILVL ATN P+ LD A+ RR +R+ + LP+ RA + ++ L S + DF + TDGYSG+D+ + A +P+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMQGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPV 353
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAG-ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +GILLFGPPGTGK+ LAKAVATEA + F +IS S + SKW GE EK VK +F LA + PS+IF+DE+DS+ G R + E EA R++K EF+V G+ D + ILVL ATN P+ LD A+ RR +R+ + LP+A RA + ++ L S + DF + T+GYSG+D+ + A +P+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMQGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPV 353
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.076e-38 Identity = 89/190 (46.84%), Postives = 122/190 (64.21%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAG-ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 P +GILLFGPPGTGK+ LAKAVATEA + F +IS S + SKW GE EK VK +F LA + PS+IF+DE+DS+ G R + E EA R++K EF+V G+ D + ILVL ATN P+ LD A+ RR +R+ + LP+ RA + ++ L S + DF + TDGYSG+D+ + A +P+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMRGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPV 353
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.323e-38 Identity = 78/183 (42.62%), Postives = 118/183 (64.48%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLC 562 +P KG LL+GPPG GKT+LAKAVATE+ ANFI+I + SKW GE EK ++ +F A ++AP+++F+DE+DS+ RR + ++ N+ + + DG+ + ++V+ ATNRP +D A++R R + + + PD R IL+V L+PDVD + IA T+GY G+DL+NLC Sbjct: 499 RPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMN--GVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLC 679 HSP 2 Score: 124.405 bits (311), Expect = 6.523e-28 Identity = 69/186 (37.10%), Postives = 116/186 (62.37%), Query Frame = 2 Query: 23 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQV-----ILAKEDLSPDVDFDAIANMTDGYSGSDLKNL 559 P KG++L+GPPGTGKT++A+AVA E+GANF++I+ I SK++G+ E+ ++ +FS A + APS+IF+DE+DS+ +RE + E R++ + + DG+ K+ ++V+ ATNR +D A+ R R R + + +PD R +IL + L + + + +A+ T G+ G+DL L Sbjct: 223 PPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV-QGEVERRVVAQLLTLMDGM--KERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAAL 405
BLAST of CX294980 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.004e-36 Identity = 79/187 (42.25%), Postives = 122/187 (65.24%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAA 574 +P KG+LLFGPPGTGKT+LAKAVA E+GANFI++ I SKW GE EK ++ +F A + AP +IF DE+D++ +R K+ N+ + DG+ ++ + ++V+AATNRP +D A++R RL R ++V +PD R I ++ +L+ DV+ + +A T+GY+G+D++ LC AA Sbjct: 484 RPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGM--EEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAA 668 HSP 2 Score: 149.058 bits (375), Expect = 2.473e-35 Identity = 83/191 (43.46%), Postives = 122/191 (63.87%), Query Frame = 2 Query: 20 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKNLCVTAAHRPI 586 +P KG+LL GPPGTGKT+LAKAVA EAGANF I+ I SK+ GE E+ ++ +F A + APS+IF+DE+D++ +R+ E R++ + + DGL K +++V+ ATNRP LD A+ R R R +++ +PD R +ILQ+ L+ DVD D +A++T G+ G+DL LC AA R + Sbjct: 211 EPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDE-ATGEVERRLVAQLLTLMDGL--KGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRAL 398 The following BLAST results are available for this feature:
BLAST of CX294980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 391
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294980 ID=CX294980; Name=CX294980; organism=Citrus clementina; type=EST; length=750bpback to top |