CX294987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.816e-47 Identity = 93/146 (63.70%), Postives = 115/146 (78.77%), Query Frame = 1 Query: 22 TRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 T NP KSCK+RGS+LR+HFKNTRE+A AI+ + LT+AK YL +V+AH++ IPF RF GGVGRT QAK QGRWP KS + IL LL+NAE+NAE KGL+V+ L I+H+QV +AQ+QRRRTYRAHGRINPYM SP +E L+ Sbjct: 9 TPSNPEKSCKSRGSNLRIHFKNTRESAMAIKGMLLTRAKAYLNNVLAHRECIPFRRFKGGVGRTGQAKI-FGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILT 153
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 180.259 bits (456), Expect = 1.002e-44 Identity = 93/146 (63.70%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 22 TRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 T NP KS ARGS LRV FKNTRETA AI LTKA++YLE V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 7 TSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44 Identity = 88/142 (61.97%), Postives = 108/142 (76.06%), Query Frame = 1 Query: 34 PTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 P KS ++RGS LRV FKNTRETA AI L +A+++LE+V+ K+A+P R+ GG GR AQ K + + RWP KSA+F+L LLKNAE+NA+ KGLD L + HIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL L+ Sbjct: 11 PAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGK-QFGVSRARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILT 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44 Identity = 92/146 (63.01%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 22 TRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 T NP KS ARGS LRV FKNTRETA AI LTKA++YL+ V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 7 TSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43 Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 1 Query: 13 QFGTRDNPT-KSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 ++ +D P KS +ARGS LRV FKNTRETA AI + L +A +LE+V + +PF R+ G +GRTAQ K + + RWPVKSA+F+LDLLKNAE+NA+ KGLD L + HIQVNQA K RRRTYRAHGRINPYM++PCHIEL L+ Sbjct: 10 RYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILT 158
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.208e-43 Identity = 89/146 (60.96%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 22 TRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 T NP KS ARGS LRV +KNTRETA AI L +A++YL+ V+ H++AIPF RF +GRT Q K + RWP KS FI DLL+N ++NAE KGLD L +SHIQVNQA KQRRRTYRAHGRIN Y SSPCHIEL L+ Sbjct: 7 TSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILT 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.496e-43 Identity = 88/141 (62.41%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 37 TKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 12 TKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.728e-42 Identity = 87/141 (61.70%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 37 TKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS F DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 12 TKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.563e-42 Identity = 93/164 (56.71%), Postives = 108/164 (65.85%), Query Frame = 1 Query: 31 NPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXXTQLATSKSKK 522 +PTK+ ARG+ LR FKNT E A AIR L KA YL+ V HK+AIPF + G +GRT Q K + RWPVKS KF+ DLL+NA++NAE KGLD + L ISHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL LS T LA S++ Sbjct: 10 DPTKTASARGAYLRTSFKNTYEVAGAIRGWNLQKALAYLDQVTDHKRAIPFRKHAGSIGRTGQGKEFGVT-KARWPVKSIKFVQDLLQNAQANAETKGLDKETLVISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQ 172
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.037e-41 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 1 Query: 31 NPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 450 N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 10 NLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIERKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148 The following BLAST results are available for this feature:
BLAST of CX294987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294987 ID=CX294987; Name=CX294987; organism=Citrus clementina; type=EST; length=748bpback to top |