CX294987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_META3 (50S ribosomal protein L22P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl22p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 50/142 (35.21%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 31 NPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 +P K+ +A G LR+ K+T E I + L KA YL V+ KQ +PF R V K ++ GR+P K++ IL +L+NA+ NAE KG++ + L I HI N+ +R RA GR +P H+++ L Sbjct: 11 DPNKTARAMGRSLRISRKHTIEICREISGMKLDKAIAYLNRVIELKQVVPFKRHGKDV---PHKKGKYGWTAGRFPQKASTQILSVLENAKKNAEYKGMNTEKLRIKHISSNKGFTIKRHMPRAFGRASPKNQETVHVQVIL 149
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 40 KSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 K KA ++ ++ AIR + L +A+ +L +V+ K+A+PF R+ G + + GR+P K+ K++L LL NAE+NA KGLD+D L I HI ++ +R RA GR HIE+ L Sbjct: 15 KLAKAVIKNIDASVRDLYNVCKAIRGMNLKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVIL 153
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15 Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 31 NPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 +P + +A DLR+ K E +R + L A RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 13 DPKRMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15 Identity = 41/147 (27.89%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 16 FGTRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 + + +P + + D + K+++ A I+ + + A+ YL+DV+A +Q++PF + GVG + GR+P K++K L+L++N SNA +G D +A+ I H+ ++ +++ R RA G +P+ ++ C +EL + Sbjct: 5 YSVKADPETTARGMLRDRPISLKHSKAIAREIKGMTIADAESYLDDVIAQRQSVPFRQHNSGVGHRSDIDGWDA---GRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_PYRCJ (50S ribosomal protein L22P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl22p PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.848e-15 Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 13 QFGTRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 450 ++G R P + KA + R+ +K + E A I+ + L +AK +LEDV+ K+ IP F A P +WPVK AK L LL+N E+NA+ KGLDV+ L I H ++ K RA GR P+ ++E+ Sbjct: 20 KYGVRITPEQIAKAYAPEQRMSWKKSVEVARFIKGMTLKQAKAWLEDVVKLKRPIPIKTFKKKQAHHATPWEGWP--VAKWPVKVAKRYLQLLENLENNAKFKGLDVERLVIIHAAAHKGIKIPNIMPRAFGRATPFNEETVNVEI 163
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.848e-15 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 49 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 459 +A+ ++L V K++ E A I+ + T+AK YL DV+A K+AIPF RF V + ++ P GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 17 RAKANELPVSPKHSIEIARFIKNMTTTEAKAYLTDVVALKKAIPFKRFNRNVAHK-RGLSKWP--AGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_CALMQ (50S ribosomal protein L22P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.104e-14 Identity = 50/140 (35.71%), Postives = 68/140 (48.57%), Query Frame = 1 Query: 49 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQ------GRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 450 KARG + R+ +K ETA AIR L + +A+ Y+E V K IP F K H N +WPVK A L +L+N ESNA +GL++D I H ++ + R RA GR P+ +IEL Sbjct: 30 KARGFEFRISWKKAIETARAIRFLTIKQAEDYMEKVKDLKAPIPIKEFT--------RKQAHHNVPWDGWPVAKWPVKVADSFLQVLRNLESNASYRGLNIDNTVIVHASASRGMRIRNYMPRALGRATPWFQDTVNIEL 161
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_UNCMA (50S ribosomal protein L22P OS=Uncultured methanogenic archaeon RC-I GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 31 NPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 +P + KA ++ V K+ +E IR + L+ AK YL+DV+ K+++PF + VG RH +G GR+PVK++ IL LLK+AE+NAE KGL+ + + I H + + + RA GR + +E+ + Sbjct: 11 DPATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH-----KRHQSGWPSGRYPVKASTEILKLLKHAEANAEYKGLETENMRIIHSTSKKGRVIQGIMPRAMGRATAWNIELVTVEVVI 149
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13 Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 49 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 450 KA ++ VH K E A AI + + +A+RYL V+ ++A+PF R G ++ GR+PVK+A+++L LL N E+NA K LDV+ L I H+ ++ +R RA GR P HIE+ Sbjct: 18 KAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRAHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
BLAST of CX294987 vs. ExPASy Swiss-Prot
Match: RL22_PICTO (50S ribosomal protein L22P OS=Picrophilus torridus GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.560e-13 Identity = 43/147 (29.25%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 16 FGTRDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 456 + ++ P +S +AR ++ + K+ AH ++ + L AK L++V+ K +P+ R+ V +R G GR+PVK+A+ LL++ +NAE KGL D+L I HI V++ + ++ T +A+GR + ++E+ + Sbjct: 4 YSIKEFPERSARARIREIDISLKDAVNVAHFLKGMDLDSAKNVLDNVIEKKVPVPYFRYMDSV------SHRKGIGPGRYPVKAARAFKKLLEDVSANAEFKGLS-DSLEIVHIAVSKGRMIKKYTPKAYGRAGAFFKDLVNLEVVV 143 The following BLAST results are available for this feature:
BLAST of CX294987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294987 ID=CX294987; Name=CX294987; organism=Citrus clementina; type=EST; length=748bpback to top |