CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14
Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   52 VQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL*CENN 489
            ++ +  E LR+YP     +R V ++ ++G L +P G  IS  + M+H DP+ + D    F P+RF   +++   +  ++  F+ GPR CIG  FA++E K +LAM+L+++ F   P   H P  +  L  + G  + LR L  + N
Sbjct:  351 LEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPE-RFDPDRFL--VNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF--LPDKDHQPKPLAELVTKSGNGIRLRILPRDEN 491          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRLYPP   + R ++K     +   LP GV + L +  +H++P++W +  + F P RF+   +  +    ++ PF+ G R CIG  FA+ E K+A+A+ L  F     P+ +  P A + L  + G HL LRKL
Sbjct:  366 LDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNPEV-FDPFRFAPDSAYHSH---AFLPFSGGARNCIGKQFAMRELKVAVALTLVRFELLPDPTRIPIPIARVVLKSKNGIHLRLRKL 509          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A14_DROME (Probable cytochrome P450 6a14 OS=Drosophila melanogaster GN=Cyp6a14 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14
Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS 396
            +Y  L  +  +  + +E LR +P    L R   K+ ++ N  ++L  G+   +PV  +HHDPE++ +   +F P RF     K  R+ ++Y PF  GPR CIGL F  ++AKI L  +L+ F F +S
Sbjct:  356 NYDVLAQMTYLDQVLSETLRKHPLLPHLIRETTKDYQIPNSDIVLDKGILALIPVHNIHHDPEIYPEPE-KFDPSRFDPEEVK-NRHPMAYLPFGDGPRNCIGLRFGKIQAKIGLVSLLRRFKFSVS 480          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4P1_DROME (Cytochrome P450 4p1 OS=Drosophila melanogaster GN=Cyp4p1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERF-SEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            D   LN LK ++    E  RL+P   ++ R   +ET+L N LILP G QI++ V  +H + + W D   EF+PERF  E +    R+  +Y PF+ G R CIG  +A+ E K  + ++L+ F
Sbjct:  362 DVGQLNKLKYLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHRNAKYW-DSPEEFRPERFLPENVQD--RHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQF 480          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LR+YPP   ++R ++      +   LP G+ + L    +HH+P +W +  + F P RF+   S   R+  S+ PF+ G R CIG  FA+ E K+A+A+ L  F     P+ +  P   L L  + G +L L+KL
Sbjct:  364 LDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEV-FDPYRFAPESS---RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPIPIPRLVLKSKNGIYLRLKKL 507          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            D + +  LK ++++  E +RL+ P  +L  R   +ET++    +P   ++ + V  +  DP+ W DDA  FKPERF +       N   Y PF  G RIC G++F L    + LA +L +F ++L
Sbjct:  343 DENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYW-DDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKL 466          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP6D4_DROME (Probable cytochrome P450 6d4 OS=Drosophila melanogaster GN=Cyp6d4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLG--NLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE-LSPSYVHAPTAVLTLHPEFGTHLILRK 471
            + K  Y  LN ++ + +   E +R YP   +L R   ++  +   N ++P G  + + +  +HHD E + D    + PERFSE       N  ++ PF  GPRICI      + +K+A+  ILQNF+ E +S S +    + + L P+ G  + L K
Sbjct:  356 DGKITYDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYFPDPET-YDPERFSE--ESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEIEFENSGIALIPKHGVRVRLSK 509          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGD----DAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            ++  L HL  + M   E LRL+PP  +++R V ++  L +  ++P G+   + V   HH+P +W D    D   F PE   E      R+ +++ PF+ GPR CIG  FA+ E K+ LA+ L  F
Sbjct:  371 EWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPENIKE------RSPLAFIPFSAGPRNCIGQTFAMAEMKVVLALTLLRF 489          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C4G15_DROME (Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 39/135 (28.89%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    1 VFGNNK--PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKL--GNLILPAGVQISLPVIMVHHDPELWGD----DAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            +FG+++    +     +K ++    E LR+YPP  ++AR + ++ KL  GN ++P G  +++  +++H +P+++ +    D   F PER      +  R+  ++ PF+ GPR C+G  +A+++ KI L+ IL+N+
Sbjct:  412 IFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIARELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER------QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNY 540          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP46A_MOUSE (Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp46a1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 45/140 (32.14%), Postives = 68/140 (48.57%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHP 441
            DY  L  L+ +  +  E LRLYPPA    R + +ET +  + +P    +     ++    + + +D + F P+RF  G  K    + +YFPF+ G R CIG  FA +E K+ +A +LQ   F L P          TL P
Sbjct:  343 DYEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGR-MDTYFEDPLTFNPDRFGPGAPKP---RFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQRFGLQEQATLKP 478          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CP4S3_DROME1.706e-1432.19Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP4A4_RABIT1.706e-1433.11Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
C6A14_DROME1.706e-1434.65Probable cytochrome P450 6a14 OS=Drosophila melano... [more]
CP4P1_DROME2.228e-1437.70Cytochrome P450 4p1 OS=Drosophila melanogaster GN=... [more]
CP4AC_RAT2.228e-1432.43Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
C71D7_SOLCH2.228e-1432.80Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
CP6D4_DROME2.910e-1430.57Probable cytochrome P450 6d4 OS=Drosophila melanog... [more]
CP4F2_HUMAN2.910e-1434.40Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
C4G15_DROME3.800e-1428.89Cytochrome P450 4g15 OS=Drosophila melanogaster GN... [more]
CP46A_MOUSE4.964e-1432.14Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp4... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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