CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A20_DROME (Probable cytochrome P450 6a20 OS=Drosophila melanogaster GN=Cyp6a20 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13
Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLT----LHPEFGTHL 459
            N K DY  +  +  ++ + +E +R  P    L R   +  +  N    +  G  + +P + +HHDPE + +   +F PERF E   +  R   ++ PF  GPR CIGL F  ++  + +A+++ NF FE  P+    P    T    L  + G HL
Sbjct:  343 NGKLDYDSMREMTYLEKVIDETMRKRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPE-KFIPERFDEDQVQ-QRPACTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEFHPTKTVVPLEYRTDDFLLSSKGGIHL 496          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            D   LN L  ++ +  EVLRLY       R   + T++G     AGV + + +  + HD E +  D   FKPER+      V     SY PF+ GP +CIG  ++L+  K+  A +++ F  ELSP
Sbjct:  333 DLDALNGLPYLEALIKEVLRLYTIVPTTGRQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYY-PDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSP 457          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP132_DROME (Probable cytochrome P450 313a2 OS=Drosophila melanogaster GN=Cyp313a2 PE=3 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKV-TRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILR 468
            L  L  +  + NE LRL P     +R   ++ +L N +++P G+ IS+ +     + + WG +A +F PE F     K+  R+  ++ PF+ G R CIG  + L+ +K+AL  IL+N+  + S  Y +          EF  H++++
Sbjct:  344 LQQLVYLDRVLNETLRLMPSVPFSSRETLEDLRLSNGVVIPKGMTISIDIFNTQRNTDYWGSEAAQFNPENFLP--EKIHDRHPYAFIPFSKGKRNCIGWRYGLMSSKLALVKILRNYKLKTSFPYENL---------EFVDHMVIK 479          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 1
Query:   16 KPDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            +P+  G  +LK ++ + +E LRL+PPA ++L R   +  ++    +PA  ++ +    +  DP LW  +A  F PERF E   +   N   + PF  G R+C GL F L   +  LAM++ +F ++L
Sbjct:  337 RPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLW-TEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKL 462          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            L  LK +  +  E +RL+PP  +L R + ++ K+G + +P    I L    V+ DPE + D  + FKPER+ +  +      ++Y PF+ GP+ CIG  FA ++ K  ++ ++++  +EL P
Sbjct:  363 LLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLV-FKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRH--YELLP 481          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C28D1_DROME (Probable cytochrome P450 28d1 OS=Drosophila melanogaster GN=Cyp28d1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-----LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSE--GISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            G  +  +  ++ L   +   +E LR++ P +   + V +  +L N     + L  G  + +PV  +HHDP+ + ++   FKPERF    G +K  R+Q  +F F  GPRIC G+ F+L + K AL  I++NF  +++P
Sbjct:  337 GTAELTFEQISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNKNGVSVKLRPGDVVIIPVNALHHDPQYY-EEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNFDIKVNP 473          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4FN_HUMAN (Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13
Identity = 45/152 (29.61%), Postives = 75/152 (49.34%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            ++  L  L    M   E LR YPP  +++R   ++ KL +  I+P G+   + +   HH+P +W D  + + P RF    +   R+ ++Y PF+ GPR CIG +FA+ E ++ +A+ L  F   +  +        L L  E G  L +  L
Sbjct:  378 EWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRIIPKGIICLVSIYGTHHNPTVWPDSKV-YNPYRFDPD-NPQQRSPLAYVPFSAGPRNCIGQSFAMAELRVVVALTLLRFRLSVDRTRKVRRKPELILRTENGLWLKVEPL 527          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGI-SKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS-----PSYVHAPTAVLTLHP 441
            P ++   HL +++    EVLR+ P A +++    N ++ +G   +P    + + +  +HHD   W D    F PERF +   S +     SY PF  GPR CIG   A  E  I +A++LQ F F++S     P  V  P  V  + P
Sbjct:  341 PSFNDRTHLLMLEATIREVLRIRPVAPLLIPHKANIDSSIGEFAIPKDTHVIINLWALHHDKNEW-DQPDRFMPERFLDPTGSHLITPTPSYLPFGAGPRSCIGEALARQELFIFMALLLQRFDFDVSDDKQLPCLVGDPKVVFLIDP 487          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C28D2_DROME (Probable cytochrome P450 28d2 OS=Drosophila melanogaster GN=Cyp28d2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query:   70 EVLRLYPPAVMLARAVNKETKLGN-----LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSE---GISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            E LRL+ P V   + V +  +  N     + L  G  +++PV  +HHDP+ + +D + FKPERF E   G  K  R++  Y  F  GPR C G+ FAL + K AL  IL+NF  +++P
Sbjct:  357 ETLRLFSPQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQYY-EDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIKVNP 473          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 1
Query:   43 LKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            +K ++ +  EVLRL+PP  +L  R ++++ KL    + AG Q+ +    +  D   WG DA EF+PER  + +         + PF  G RIC G+ FA+   ++ LA ++  F++ +
Sbjct:  348 MKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRM 465          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
C6A20_DROME1.886e-1329.49Probable cytochrome P450 6a20 OS=Drosophila melano... [more]
CP311_DROME2.463e-1334.13Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
CP132_DROME2.463e-1329.25Probable cytochrome P450 313a2 OS=Drosophila melan... [more]
C71D9_SOYBN2.463e-1332.28Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C4D21_DROME2.463e-1331.97Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
C28D1_DROME2.463e-1331.88Probable cytochrome P450 28d1 OS=Drosophila melano... [more]
CP4FN_HUMAN3.217e-1329.61Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE... [more]
CP17A_MOUSE3.217e-1331.76Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
C28D2_DROME3.217e-1338.14Probable cytochrome P450 28d2 OS=Drosophila melano... [more]
C71AE_ARATH4.202e-1331.36Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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